Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0918
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804...    32   0.38 
04_03_0357 + 14852584-14853058,14853116-14855754                       30   1.5  
06_01_0295 - 2154069-2155483,2155561-2155708                           29   2.7  
08_02_0610 + 19307537-19308011,19308187-19310846                       29   3.5  
08_01_0526 + 4575160-4576719                                           29   4.7  
08_02_1022 + 23707993-23708528,23708620-23708706,23708807-237088...    28   6.2  
07_03_1688 + 28681455-28681569,28682115-28682413                       28   6.2  
04_03_0204 + 12643435-12644001                                         28   8.1  

>01_05_0491 -
           22680011-22680125,22680210-22680307,22680392-22680472,
           22680564-22680677,22680757-22680823,22680947-22681017,
           22681099-22681236,22681324-22681530,22681630-22681773,
           22681856-22682017,22682117-22682173,22682256-22682348,
           22682425-22682542,22682678-22682817,22683031-22683590,
           22683703-22683805
          Length = 755

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -3

Query: 321 RRPDNIEQNPHVPNLRDPCICADTRDILIKTKNSEIYLSVGLNRPIPASFLYKLYV 154
           R  D  E N  +P L DP      +++LIK  + ++  S+G  RPI A  +Y+  +
Sbjct: 333 RGVDIHENNSQLPGLNDPEAEKQQQELLIKCISEDLGFSIG--RPIAAYLIYRCLI 386


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 408 KNDRPIYLRILQTTLPTSARTRTAMEKVSPFRKSMAQREGERAERSAL 551
           K+   IYL+ +         +   ++++   R+ +A RE ERAER+ L
Sbjct: 581 KSQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATL 628


>06_01_0295 - 2154069-2155483,2155561-2155708
          Length = 520

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = -2

Query: 598 YLLSKDRLLL---LGYPCQSADL--SALSPSRWAILFRNGLTFSIAV 473
           Y++   R+LL   LG+  Q+  L  S ++PSRW   F NG   S+ V
Sbjct: 139 YMVILGRVLLGVGLGFANQAVPLYLSEMAPSRWRGAFSNGFQLSVGV 185


>08_02_0610 + 19307537-19308011,19308187-19310846
          Length = 1044

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 408 KNDRPIYLRILQTTLPTSARTRTAMEKVSPFRKSMAQREGERAERSAL 551
           K+   IYL+ +         +   + ++   R+ +A RE ERAER+ L
Sbjct: 541 KSQGAIYLKEITFRSKDPRHSSEVVPQIKTLRRQVASRESERAERATL 588


>08_01_0526 + 4575160-4576719
          Length = 519

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/85 (24%), Positives = 31/85 (36%)
 Frame = -1

Query: 683 TVLPSEISKAVFGHKIGSSSDVLCVFRFLFTLKGQAAAPGLSLSECRSFCSFPLSLGHTF 504
           T L +     +FG+ IG S  V  +  FL        A   +  +   +C F   L   F
Sbjct: 26  TCLVASSGGLIFGYDIGISGGVTSMDSFLSEFFPSVYAQAKASKDTNQYCKFDSQLLTLF 85

Query: 503 SKRAHLLHCGTSPG*CWQRRLKNSK 429
           +   +L    TS    W  R+   K
Sbjct: 86  TSSLYLAALATSFVAAWVTRVFGRK 110


>08_02_1022 +
           23707993-23708528,23708620-23708706,23708807-23708863,
           23708955-23709261,23709545-23709631,23709720-23709767
          Length = 373

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 637 LVLLPMCFAFFVFYLLSKDRLLLLGYPCQSADLS 536
           LVLL    A    Y+L +D LLL+G P   A L+
Sbjct: 30  LVLLMFAVALTPTYVLMEDLLLLIGQPADLASLA 63


>07_03_1688 + 28681455-28681569,28682115-28682413
          Length = 137

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 526 GKEQKDRHSDRDSPGAAACPLR 591
           GK      S RD P AAACPL+
Sbjct: 8   GKSPSSSASSRDDPEAAACPLQ 29


>04_03_0204 + 12643435-12644001
          Length = 188

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 359 CCLDAILCIPRAGGDRITS 303
           CCL A+LC+PRA    + +
Sbjct: 6   CCLVAVLCLPRASASPVAA 24


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,168,566
Number of Sequences: 37544
Number of extensions: 413334
Number of successful extensions: 1150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)