Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0917
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.24 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 158  IEFSKESPEGNGDMPIETVKVVGLRKVP-GQPLGLTVTTDEHGQLIV 295
            I    E+  G+ + P ETV ++   +VP G P  + V T++   L+V
Sbjct: 969  IRIVAENEIGSSE-PSETVTIITAEEVPGGPPTSIRVETNDQHSLVV 1014


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 431 PYHLVLLQLPSVAPLIQCEPR 369
           PY   +LQLP+V  + + +P+
Sbjct: 61  PYMSSVLQLPTVTEIQETQPQ 81


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 171 FENSIRSGNSFGINLSSIPDP 109
           F N + +  +FGI ++S+ +P
Sbjct: 134 FSNDVIATAAFGIRVNSVQEP 154


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 431 PYHLVLLQLPSVAPLIQCEPR 369
           PY   +LQLP+V  + + +P+
Sbjct: 52  PYMSSVLQLPTVTEIQETQPQ 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,899
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)