Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0917
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 31 0.20
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 30 0.26
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 30 0.35
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 29 0.61
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 29 0.61
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.1
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 1.8
SPAC1399.04c |||uracil phosphoribosyltransferase |Schizosaccharo... 27 2.4
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 3.2
SPCC777.15 |||tRNA dihydrouridine synthase Dus4 |Schizosaccharom... 26 4.3
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 26 4.3
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 25 7.5
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 25 9.9
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 9.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.9
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 25 9.9
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 497 YVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQASHVERPEIV-GLIPS 670
YV L+DY IP +EI +F+KGD L + ++ WW + P GL PS
Sbjct: 870 YVIALYDYQAQ----IP-EEI--SFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPS 921
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 30.3 bits (65), Expect = 0.26
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +2
Query: 434 TLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDP 613
T K+ P + + K T +V+ ++ + + KE+ L GD++Q+S++ P
Sbjct: 262 TEKISPTPFSTPKRKSKKETVFVKAIYSFTGRNE-----KELDL--HTGDVIQVSEQLGP 314
Query: 614 NWWQASHV 637
+W+ V
Sbjct: 315 DWYMGEKV 322
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 452 NLKEKSSQLTNKLTCY--VRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQ 625
N +++S+ T+ + VR L+D+ T+ L+FKKGDI+ + + +WW+
Sbjct: 202 NQRQESNLATSPASTVSRVRALYDFAATEQG-------ELSFKKGDIILVLESVYKDWWK 254
Query: 626 AS 631
S
Sbjct: 255 GS 256
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 497 YVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQ 625
YV L+DY D IP +EI +F+KGD + + + WW+
Sbjct: 611 YVSALYDY----DAAIP-EEI--SFRKGDTIAVLKLYEDGWWE 646
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 500 VRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQAS-HVERPEIVGLIPS 670
V+ ++DY +D L+F + +I+ D DPNWW+ H R GL PS
Sbjct: 805 VKAIYDYQAQEDN-------ELSFFEDEIIANVDCVDPNWWEGECHGHR----GLFPS 851
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 29.1 bits (62), Expect = 0.61
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 476 LTNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQASHVERPEIV 655
+ +L C VR L+ + P + +E L F +GD+++ D WW H+
Sbjct: 3 IPKQLPCMVRALYAW-PGE------REGDLKFTEGDLIECLSIGDGKWWIGRHI-NTNTQ 54
Query: 656 GLIPS 670
G+ PS
Sbjct: 55 GIFPS 59
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 356 LLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQD 535
L V+G+ E + L A+ + ++L PN K+K L C+ R +F+ D
Sbjct: 176 LQSVEGLQREQRKILFNAIDILSHEISLIASPNSKKK----YKSLYCW-RKIFEIYMDSD 230
Query: 536 TLIPCKE 556
I CKE
Sbjct: 231 IFISCKE 237
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = -2
Query: 222 TTFTVSIGISPLPSGLSFENSIRSGNSFGINLSSIPDPLSNQILPIW 82
TT SI P PSGLS NS + +SF IP + Q+LPI+
Sbjct: 337 TTSIPSINNQPFPSGLSASNSNFASSSF------IPQSVP-QLLPIY 376
>SPAC1399.04c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 220
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 311 GSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKL 490
G AAA V VG +L++ D E++ + DR+ L + P L +S +
Sbjct: 95 GLAAACNYSVPVGKLLVQRDETTFEAKLMFCKLPKDAQDRLVLLLDPLLATGNSVILAIQ 154
Query: 491 TCYVRTLFDYNPTQDTLIPCKEIGLT 568
T + + + N LI C E G+T
Sbjct: 155 TLINKGIPEENIVFVNLIACNE-GIT 179
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 497 YVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWW 622
YV+ L+ Y D + L+ ++GDI+Q+++R N W
Sbjct: 588 YVKALYAYTAQSD-------MELSIQEGDIIQVTNRNAGNGW 622
>SPCC777.15 |||tRNA dihydrouridine synthase Dus4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 326
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 250 RLSWYF-SKTYNFYCFYRHISVTLGTL 173
R WY S + NF+ FY H++ +G +
Sbjct: 255 RFLWYSTSYSLNFHLFYHHLTTMMGQM 281
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 545 PCKEIGLTFKKGDILQISDRKDPNWW 622
P E L KKGD+L + D WW
Sbjct: 434 PETENELKLKKGDLLLVLKEIDEGWW 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 62 ALIEAHDQ--IGKIWLERGSGIDDKLIPNEFPDLIEFSKESPE 184
AL E H+ IGKI + S + DK FP LI F + E
Sbjct: 66 ALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSE 108
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 334 GLFCCCTSCKYPCNNKLSML 275
GLF CC C PC+ LS L
Sbjct: 127 GLFICCEGC--PCSFHLSCL 144
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 530 QDTLIPCKEIGLTFKKGDILQISDRKDPNWWQASHVE 640
+D L+ CKE+ FKK IL+ K+ S++E
Sbjct: 53 KDYLLTCKELAGFFKKRSILEEESGKNLQKLAKSYLE 89
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 9.9
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Frame = -2
Query: 309 ASILATISCPCSSVVTVKPKGCPGTFLRPT---TFTVSIGISPLPSGLSFENSIRS---G 148
+S L T S C++ ++ P G T + PT T T S P P+ S + S
Sbjct: 275 SSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPS 334
Query: 147 NSFGINLSSIPDPLSNQILPI 85
S S+ P N P+
Sbjct: 335 TSTSCTTSTSIPPTGNSTTPV 355
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 563 LTFKKGDILQISDR--KDPNWW 622
L+F+KGDI+ I +R +WW
Sbjct: 390 LSFQKGDIIDIVERSGSHDDWW 411
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,628,659
Number of Sequences: 5004
Number of extensions: 53727
Number of successful extensions: 162
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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