BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0917 (670 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0838 + 11641484-11642030,11643614-11643650,11643784-116438... 31 0.63 10_08_0168 - 15379897-15380819,15381306-15381894 31 1.1 10_01_0243 + 2538994-2539193,2539297-2539471,2539568-2539726,254... 30 1.9 12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 29 2.5 03_05_0655 + 26491238-26491696 29 3.3 01_05_0753 + 24929013-24929302,24929427-24929679 29 3.3 06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 29 4.4 02_05_0359 - 28269236-28269541,28270857-28270919,28271439-282714... 29 4.4 10_08_0861 - 21139173-21139613 28 7.7 09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 28 7.7 05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258... 28 7.7 >03_02_0838 + 11641484-11642030,11643614-11643650,11643784-11643841, 11646176-11646265,11646796-11646913,11648093-11648277, 11648330-11648455,11648578-11648634,11648741-11648821, 11649068-11649102,11649265-11649354,11649443-11649599, 11649785-11649901 Length = 565 Score = 31.5 bits (68), Expect = 0.63 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +2 Query: 110 GSGIDDKLIPNEFPDLIEFSKESPEGNGDM-PIETVKVVGLRKVPGQPLGLTVTTDEHGQ 286 GS + DK+I E P + F E D+ P +V + KV GL+ + H + Sbjct: 192 GSQVFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERHVE 251 Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDG 373 ++ + AKQ + G ++ DG Sbjct: 252 ILGYLLYVAKVVAKQEGLEDGYRIVINDG 280 >10_08_0168 - 15379897-15380819,15381306-15381894 Length = 503 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 284 QLIVARILAGSAAAKQALVSVGDVLLEVDGV-HIESEEQLKEAVAKPNDRVTLKVGP 451 +L+V AG A + V G+V ++GV H E E L+E V K + V P Sbjct: 421 RLVVREWRAGVAVGDRGAVDAGEVRARIEGVMHGEEGEVLREQVGKMRATLHAAVAP 477 >10_01_0243 + 2538994-2539193,2539297-2539471,2539568-2539726, 2540109-2540205,2540420-2540490,2541196-2541247, 2541778-2541826,2541965-2542102,2542653-2542772, 2542861-2542990 Length = 396 Score = 29.9 bits (64), Expect = 1.9 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = -1 Query: 325 CCCTSCKYPCNNKLSMLIGCHSQT*RLSWYFSKTYNFYCFYRHISVTLGT 176 C C +C+ L+ L+ H ++ T+++ CF+R I T+ T Sbjct: 324 CSCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHHYLCFFRLIRDTIKT 373 >12_02_0726 - 22552005-22552035,22552507-22552598,22552970-22553094, 22553221-22553311,22553475-22553755,22554211-22554394, 22554499-22554583,22554692-22554782,22554909-22555293, 22555457-22555669,22555873-22556418,22556572-22556788, 22556907-22557058,22557519-22557663,22557846-22557907, 22559130-22559291,22559393-22559482,22560055-22560215, 22560907-22560997,22561125-22561308,22561556-22561737, 22561857-22562086,22562622-22562685 Length = 1287 Score = 29.5 bits (63), Expect = 2.5 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = +2 Query: 293 VARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSS 472 +AR ++G A ++ +L D + + +H+ +E LK+ V+ PN +L +++ Sbjct: 527 MARTMSGPATSETSLPV--DRPMRLSEIHVAAEHALKQTVSDPNFMTSLSSLEEFEKRYM 584 Query: 473 QLT 481 +LT Sbjct: 585 ELT 587 >03_05_0655 + 26491238-26491696 Length = 152 Score = 29.1 bits (62), Expect = 3.3 Identities = 22/77 (28%), Positives = 32/77 (41%) Frame = +2 Query: 107 RGSGIDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQ 286 RG G + P E P L F + GN P K++GL G LGL ++ G Sbjct: 73 RGGGAAAAVRPEEDPFLAAFLACTERGNRGTPKGGSKLLGLGLGLGSGLGLGLSCKGPGG 132 Query: 287 LIVARILAGSAAAKQAL 337 ++ + + QAL Sbjct: 133 VVQSVVRLAKTMPPQAL 149 >01_05_0753 + 24929013-24929302,24929427-24929679 Length = 180 Score = 29.1 bits (62), Expect = 3.3 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +2 Query: 515 DYNPTQDTLIPCKEIGLTFKKGD-ILQISDRKDPNWWQASHVERPEIVGLIP 667 D N IP E+ TFK GD ++ DP W AS E+ +P Sbjct: 74 DVNNPYSHRIPICELTYTFKSGDKVIASGTMPDPGWIAASGTTNLELPVKVP 125 >06_03_0468 - 21083754-21083869,21083986-21084069,21085633-21085920, 21087525-21087687 Length = 216 Score = 28.7 bits (61), Expect = 4.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 282 PCSSVVTVKPKGCPGTFLRPTTFTVSIGISPL 187 P S V V+PK CPG R + F ++PL Sbjct: 68 PTSGVFEVEPKCCPGFMYRCSIFIGRTSLNPL 99 >02_05_0359 - 28269236-28269541,28270857-28270919,28271439-28271459, 28271660-28271716,28271789-28271874,28271982-28272039, 28272176-28272311,28272799-28273073,28273564-28273602, 28274052-28274143,28274422-28274454,28275041-28275088, 28275191-28275323 Length = 448 Score = 28.7 bits (61), Expect = 4.4 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 83 QIGKIWLERGSGIDDKLIPNEFPDLIEFSKESPEGNGDM 199 ++ +IW+ERG G KL+ ++ L +S+ + D+ Sbjct: 355 KLSQIWIERGLGFPSKLVMDDSMPLHAWSRSAVASESDL 393 >10_08_0861 - 21139173-21139613 Length = 146 Score = 27.9 bits (59), Expect = 7.7 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = +2 Query: 185 GNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLE 364 G+G PI+ +K+ V LG+ V HG +LAG A A A+ V Sbjct: 61 GHGRCPIDALKLRVCANVLNGALGVNVG---HGPYDCCPLLAGLADADAAVCLCTAVKAN 117 Query: 365 VDGVHIESEEQLK 403 V GV++ +LK Sbjct: 118 VLGVNLNVPVELK 130 >09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-766236, 767481-767607,768665-768769,768842-769424,769470-769775, 770048-770139,770391-770440 Length = 620 Score = 27.9 bits (59), Expect = 7.7 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Frame = -2 Query: 288 SCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGN-SFGI-NLSSIP 115 S P ++ V G P FL TT + I +P G I G G+ +++ + Sbjct: 349 SIPTGEMMPVS--GSPFNFLTETT--IGSRIDQVPGGYDHNFVIDCGEVKSGLCHVAKVT 404 Query: 114 DPLSNQILPIWS 79 DP S+++L IW+ Sbjct: 405 DPSSSRVLDIWA 416 >05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078, 2581209-2581326,2583350-2583440,2585167-2585207, 2585854-2585981,2586078-2586353,2587318-2587472, 2587557-2587700,2587991-2588567 Length = 577 Score = 27.9 bits (59), Expect = 7.7 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLK 403 LIV + GS A K V VGDV+ +G HI S +L+ Sbjct: 506 LIVKEVSEGSIAEKLG-VRVGDVIKFFNGKHISSTVELE 543 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,858,167 Number of Sequences: 37544 Number of extensions: 343929 Number of successful extensions: 916 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1691314196 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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