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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0917
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0838 + 11641484-11642030,11643614-11643650,11643784-116438...    31   0.63 
10_08_0168 - 15379897-15380819,15381306-15381894                       31   1.1  
10_01_0243 + 2538994-2539193,2539297-2539471,2539568-2539726,254...    30   1.9  
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530...    29   2.5  
03_05_0655 + 26491238-26491696                                         29   3.3  
01_05_0753 + 24929013-24929302,24929427-24929679                       29   3.3  
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859...    29   4.4  
02_05_0359 - 28269236-28269541,28270857-28270919,28271439-282714...    29   4.4  
10_08_0861 - 21139173-21139613                                         28   7.7  
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76...    28   7.7  
05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258...    28   7.7  

>03_02_0838 +
           11641484-11642030,11643614-11643650,11643784-11643841,
           11646176-11646265,11646796-11646913,11648093-11648277,
           11648330-11648455,11648578-11648634,11648741-11648821,
           11649068-11649102,11649265-11649354,11649443-11649599,
           11649785-11649901
          Length = 565

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 110 GSGIDDKLIPNEFPDLIEFSKESPEGNGDM-PIETVKVVGLRKVPGQPLGLTVTTDEHGQ 286
           GS + DK+I  E P  + F  E      D+ P     +V + KV     GL+   + H +
Sbjct: 192 GSQVFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERHVE 251

Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDG 373
           ++   +      AKQ  +  G  ++  DG
Sbjct: 252 ILGYLLYVAKVVAKQEGLEDGYRIVINDG 280


>10_08_0168 - 15379897-15380819,15381306-15381894
          Length = 503

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 284 QLIVARILAGSAAAKQALVSVGDVLLEVDGV-HIESEEQLKEAVAKPNDRVTLKVGP 451
           +L+V    AG A   +  V  G+V   ++GV H E  E L+E V K    +   V P
Sbjct: 421 RLVVREWRAGVAVGDRGAVDAGEVRARIEGVMHGEEGEVLREQVGKMRATLHAAVAP 477


>10_01_0243 +
           2538994-2539193,2539297-2539471,2539568-2539726,
           2540109-2540205,2540420-2540490,2541196-2541247,
           2541778-2541826,2541965-2542102,2542653-2542772,
           2542861-2542990
          Length = 396

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 325 CCCTSCKYPCNNKLSMLIGCHSQT*RLSWYFSKTYNFYCFYRHISVTLGT 176
           C C +C+      L+ L+  H    ++      T+++ CF+R I  T+ T
Sbjct: 324 CSCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHHYLCFFRLIRDTIKT 373


>12_02_0726 -
           22552005-22552035,22552507-22552598,22552970-22553094,
           22553221-22553311,22553475-22553755,22554211-22554394,
           22554499-22554583,22554692-22554782,22554909-22555293,
           22555457-22555669,22555873-22556418,22556572-22556788,
           22556907-22557058,22557519-22557663,22557846-22557907,
           22559130-22559291,22559393-22559482,22560055-22560215,
           22560907-22560997,22561125-22561308,22561556-22561737,
           22561857-22562086,22562622-22562685
          Length = 1287

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/63 (25%), Positives = 34/63 (53%)
 Frame = +2

Query: 293 VARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGPNLKEKSS 472
           +AR ++G A ++ +L    D  + +  +H+ +E  LK+ V+ PN   +L      +++  
Sbjct: 527 MARTMSGPATSETSLPV--DRPMRLSEIHVAAEHALKQTVSDPNFMTSLSSLEEFEKRYM 584

Query: 473 QLT 481
           +LT
Sbjct: 585 ELT 587


>03_05_0655 + 26491238-26491696
          Length = 152

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/77 (28%), Positives = 32/77 (41%)
 Frame = +2

Query: 107 RGSGIDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQ 286
           RG G    + P E P L  F   +  GN   P    K++GL    G  LGL ++    G 
Sbjct: 73  RGGGAAAAVRPEEDPFLAAFLACTERGNRGTPKGGSKLLGLGLGLGSGLGLGLSCKGPGG 132

Query: 287 LIVARILAGSAAAKQAL 337
           ++ + +        QAL
Sbjct: 133 VVQSVVRLAKTMPPQAL 149


>01_05_0753 + 24929013-24929302,24929427-24929679
          Length = 180

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +2

Query: 515 DYNPTQDTLIPCKEIGLTFKKGD-ILQISDRKDPNWWQASHVERPEIVGLIP 667
           D N      IP  E+  TFK GD ++      DP W  AS     E+   +P
Sbjct: 74  DVNNPYSHRIPICELTYTFKSGDKVIASGTMPDPGWIAASGTTNLELPVKVP 125


>06_03_0468 -
           21083754-21083869,21083986-21084069,21085633-21085920,
           21087525-21087687
          Length = 216

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 282 PCSSVVTVKPKGCPGTFLRPTTFTVSIGISPL 187
           P S V  V+PK CPG   R + F     ++PL
Sbjct: 68  PTSGVFEVEPKCCPGFMYRCSIFIGRTSLNPL 99


>02_05_0359 -
           28269236-28269541,28270857-28270919,28271439-28271459,
           28271660-28271716,28271789-28271874,28271982-28272039,
           28272176-28272311,28272799-28273073,28273564-28273602,
           28274052-28274143,28274422-28274454,28275041-28275088,
           28275191-28275323
          Length = 448

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 83  QIGKIWLERGSGIDDKLIPNEFPDLIEFSKESPEGNGDM 199
           ++ +IW+ERG G   KL+ ++   L  +S+ +     D+
Sbjct: 355 KLSQIWIERGLGFPSKLVMDDSMPLHAWSRSAVASESDL 393


>10_08_0861 - 21139173-21139613
          Length = 146

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +2

Query: 185 GNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLE 364
           G+G  PI+ +K+     V    LG+ V    HG      +LAG A A  A+     V   
Sbjct: 61  GHGRCPIDALKLRVCANVLNGALGVNVG---HGPYDCCPLLAGLADADAAVCLCTAVKAN 117

Query: 365 VDGVHIESEEQLK 403
           V GV++    +LK
Sbjct: 118 VLGVNLNVPVELK 130


>09_01_0042 +
           764349-764763,764853-764902,765096-765172,766179-766236,
           767481-767607,768665-768769,768842-769424,769470-769775,
           770048-770139,770391-770440
          Length = 620

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -2

Query: 288 SCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGN-SFGI-NLSSIP 115
           S P   ++ V   G P  FL  TT  +   I  +P G      I  G    G+ +++ + 
Sbjct: 349 SIPTGEMMPVS--GSPFNFLTETT--IGSRIDQVPGGYDHNFVIDCGEVKSGLCHVAKVT 404

Query: 114 DPLSNQILPIWS 79
           DP S+++L IW+
Sbjct: 405 DPSSSRVLDIWA 416


>05_01_0329 -
           2580083-2580115,2580787-2580864,2580986-2581078,
           2581209-2581326,2583350-2583440,2585167-2585207,
           2585854-2585981,2586078-2586353,2587318-2587472,
           2587557-2587700,2587991-2588567
          Length = 577

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLK 403
           LIV  +  GS A K   V VGDV+   +G HI S  +L+
Sbjct: 506 LIVKEVSEGSIAEKLG-VRVGDVIKFFNGKHISSTVELE 543


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,167
Number of Sequences: 37544
Number of extensions: 343929
Number of successful extensions: 916
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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