Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0917
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 9e-30
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 122 4e-28
SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 8e-28
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 57 1e-08
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 40 0.002
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 38 0.010
SB_3441| Best HMM Match : PDZ (HMM E-Value=0.0055) 38 0.010
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 37 0.013
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 37 0.017
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 36 0.030
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 36 0.039
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 33 0.16
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 33 0.16
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 33 0.16
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 33 0.16
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 33 0.21
SB_11989| Best HMM Match : Ca_channel_B (HMM E-Value=1.1e-16) 33 0.21
SB_50446| Best HMM Match : HIT (HMM E-Value=1.6e-36) 33 0.28
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_51269| Best HMM Match : PAE (HMM E-Value=8.9e-05) 31 0.85
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 31 1.1
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_58405| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 30 2.0
SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8) 29 4.5
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 4.5
SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15) 29 4.5
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 6.0
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_43914| Best HMM Match : IRK (HMM E-Value=5.3) 28 6.0
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 28 6.0
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_22155| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_21642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 28 7.9
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 28 7.9
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 28 7.9
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 127 bits (306), Expect = 9e-30
Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 2/218 (0%)
Frame = +2
Query: 23 AELAIIVSRAHFKALIEAHDQIG-KIWLERGSGIDDKLIPNEFPDLIEFSKESPEGNGDM 199
AEL ++ HF+AL++ HD + K ++ P + F NG
Sbjct: 93 AELCGLLQEPHFRALMQTHDAVAFKTYMPTPPS----------PGVDSF-------NGFA 135
Query: 200 PIETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVH 379
E +++VGL K + LG+T+ +++ QLI++RI+ G +Q L+ VGD++ EV+G
Sbjct: 136 AGEPIRMVGLHKHANEHLGVTLKVEDN-QLIISRIIHGGMIDRQGLLHVGDIIKEVNGKD 194
Query: 380 IESE-EQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLIPCKE 556
+ +L++ +AK ++TLKV P+ E + +VR FDY+P++D IPC++
Sbjct: 195 MSGNPSELQDYLAKSTGKITLKVLPSYYESPALCQ----VFVRAHFDYDPSKDDQIPCQD 250
Query: 557 IGLTFKKGDILQISDRKDPNWWQASHVERPEIVGLIPS 670
GL FK+G++LQI D++D NWWQA V+ G+IPS
Sbjct: 251 AGLAFKQGEVLQIVDQEDANWWQAKKVDDSRAAGIIPS 288
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 122 bits (293), Expect = 4e-28
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 2/207 (0%)
Frame = +2
Query: 11 TIEQAELAIIVSRAHFKALIEAHDQIGKIWLERGSGIDDKLIPNEFPDLIEFSKESPEGN 190
T ++ ELA ++S + L+ AHD+ L + D+ NE +L + + +
Sbjct: 383 TRDEVELASLLSSPTMQGLLLAHDR-----LAFREALPDENEENEGRELSRQNSSDADQS 437
Query: 191 GDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVD 370
M ++VK+V + K PLG TV +E G +++ RI+ G AA K L+ GD +LE++
Sbjct: 438 SQMEDDSVKIVRIDK-SCDPLGATVK-NEDGAVLIGRIVKGGAAEKSGLLHEGDEILEIN 495
Query: 371 GVHIE--SEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLI 544
GVH++ S ++ E +A N +T + P + + L+ +VR FDY+P D I
Sbjct: 496 GVHMKGKSVSEVCELLADMNGTLTFLLVPKTRSIGT-LSRDRAVHVRANFDYDPYDDEFI 554
Query: 545 PCKEIGLTFKKGDILQISDRKDPNWWQ 625
PC+E+GL F++GDIL + D++D NWWQ
Sbjct: 555 PCRELGLAFRRGDILHVVDQEDQNWWQ 581
>SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 120 bits (290), Expect = 8e-28
Identities = 77/223 (34%), Positives = 122/223 (54%), Gaps = 5/223 (2%)
Frame = +2
Query: 17 EQAELAIIVSRAHFKALIEAHDQIGKIWLERGSGIDDKLIPNEFPDLIEFSKESPEGNGD 196
E ELA ++S H + ++ A+D++ +I + + + +I D + ++ +G+ D
Sbjct: 125 EACELAQLLSNVHIQGMLSAYDRVAEIDVSQQNQESGTVIG----DGGQRNENGYKGS-D 179
Query: 197 MPIE-TVKVVGLRKVPGQPLGLTVTTDEH-GQLIVARILAGSAAAKQALVSVGDVLLEVD 370
+E VK V L K +PLG TV DE G ++VARIL G + + VGDV+ E++
Sbjct: 180 SDLELAVKYVRLIKSGKEPLGATVKCDEDTGDIVVARILRGGMVDRSGTLGVGDVIQEIN 239
Query: 371 GVHI--ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLI 544
+ ++ ++ E + + + V KV P +K + T +R LF+Y+P D LI
Sbjct: 240 NQSVIGKTTNEVVEIMERLSGSVLFKVIP-MKAVDRKSTADTKVRLRALFNYDPANDDLI 298
Query: 545 PCKEIGLTFKKGDILQISDRKDPNWWQA-SHVERPEIVGLIPS 670
PCKE GL KGDILQ+ R+DPNWWQA + +GL+PS
Sbjct: 299 PCKEAGLPLVKGDILQVVSREDPNWWQARKEDDVNNTIGLVPS 341
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 56.8 bits (131), Expect = 1e-08
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Frame = +2
Query: 251 LGLTVTTDEHGQ-LIVARILAGSAAAKQALVSVGDVLLEVDGVHIES--EEQLKEAVAKP 421
LG + E + + ++ ILAG A + GD + V+ V + + EQ A+
Sbjct: 195 LGFNIVGGEENEGIFISFILAGGVADLSGELRRGDQIKAVNDVDLTNATHEQAAAALKGA 254
Query: 422 NDRVTL--KVGP-----------NLKEKSSQLTN-------KLTCYVRTLFDYNPTQDTL 541
VT+ + P +L+EK +N K YVR LFDY+ T+D+
Sbjct: 255 GSTVTITAQYKPEEYNQFETKIHHLREKMMVTSNQGVVTSVKRQLYVRALFDYDKTKDSG 314
Query: 542 IPCKEIGLTFKKGDILQISDRKDPNWWQA---SHVERPEIVGLIPS 670
+P + GL+FK GDIL +++ D WWQA + V E G+IPS
Sbjct: 315 LPSQ--GLSFKYGDILHVTNASDDEWWQARKLNAVGEEEGRGVIPS 358
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +2
Query: 149 PDLIEFSKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQ-----LIVARILAG 313
PD + + + P P ++V+ LRK PG+ LG T+ E+ Q + V + G
Sbjct: 945 PDTPQSTNQRPNDIVASPERDIQVIKLRKEPGKGLGFTILGGENSQRLDLGIFVKSVTEG 1004
Query: 314 SAAAKQALVSVGDVLLEVDGVHIE 385
S A K + GD +L V+G +E
Sbjct: 1005 SVAFKDGRLKAGDRILAVNGTSLE 1028
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Frame = +2
Query: 218 VVGLRKVPGQPLGLTV-----TTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHI 382
VV L K+ G LGL+V TT + G + V ++ A + + +GD +LEV+GV +
Sbjct: 1254 VVELEKI-GSSLGLSVSGGVNTTVKLGGIYVKSLMLNGPADRNGKIRIGDRILEVNGVSL 1312
Query: 383 --ESEEQLKEAVAKPNDRVTLKVGPNLK 460
+ +Q E + + R L + +++
Sbjct: 1313 VGVTHKQAVEIIKRAPQRCRLVIDRSIQ 1340
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Frame = +2
Query: 194 DMP-IET---VKVVGLRKVPGQPLGLTVTTDEHGQ---LIVARILAGSAAAKQALVSVGD 352
D+P +ET ++VV LR+ P LG+++ ++ GQ + V +L S+ A+ + GD
Sbjct: 1282 DVPFVETESGLRVVELRREPEVGLGISIAGNKRGQRQGVHVRHVLENSSVARLGELKAGD 1341
Query: 353 VLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLT 481
+LEVDG + S E+ E + + V V +++K L+
Sbjct: 1342 QILEVDGHDLRNASHEEAVEVIRRARSPVRFVV-RTIQDKEDPLS 1385
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Frame = +2
Query: 107 RGSGI-DDKLIPNEFPDLIEFSKESPEGNGDMPIET-VKVVGLRKVPGQPLGLTVTTDEH 280
+ +GI +D + E+ ++E K E + ET + V + K PG+ LG+ +
Sbjct: 197 KSNGISEDSVEDAEYNCVLEAQKILGEDLSLLSDETKAREVVVNKKPGEALGVMIVESGW 256
Query: 281 GQLIVARILAGSA----AAKQALVSVGDVLLEVDGVHI------ESEEQLKEAVAKPNDR 430
G +I I+A A AAK V+VGD +L V+ + E + +K ++P +
Sbjct: 257 GSMIPTAIIAHLAKDGPAAKSGRVNVGDQILSVNNTSLVGLPLPECQNVIKN--SRPGTK 314
Query: 431 VTLK 442
VTLK
Sbjct: 315 VTLK 318
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 551 KEIGLTFKKGDILQIS-DRKDPNWWQASHVERPEIVGLIP 667
K L FKKG++L I D +DPNW++A + + ++GLIP
Sbjct: 147 KSRDLPFKKGEVLVIERDTRDPNWYRARN--KTGVIGLIP 184
>SB_3441| Best HMM Match : PDZ (HMM E-Value=0.0055)
Length = 160
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 62 ALIEAHDQIGKIWLERGSGIDDKLIPNEFP-DLIEFS-KESPEGNGDMPIETVKVVGLRK 235
A+++AHD + + + + I L P+ P D I+ S E PE + V++V K
Sbjct: 1 AMLQAHDGVLQEEKQDETSI---LPPDTTPNDTIDNSIPERPE-----KLTRVRLVQFHK 52
Query: 236 VPGQPLGLTVTTDEHGQLIVARILAGSAAAKQ 331
P +P+G+T+ ++ G+ +VARI+ G +Q
Sbjct: 53 NPNEPMGITLKLNDEGRCVVARIMYGGMIHRQ 84
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +2
Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDGVHIES--EEQLKEAVAKPNDRVTLKVGPNLK 460
L V I G A++Q + +GD +L+++G H++ +++ + K D++ + ++
Sbjct: 503 LYVKDISFGGVASEQKSLEIGDYILKMNGKHLDKIIASSIEKVIKKSGDKMKFHITRMIQ 562
Query: 461 EKSSQLTNKLTCYVRTLF--DYNPTQDTLIPCKE 556
S T+K+ V + D++ +T CK+
Sbjct: 563 ASSRHGTSKVVLVVTCAYRDDFDCVTETKSGCKK 596
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 293 VARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAV-----AKPNDRVTLKVGPNL 457
++ I+ GSAA + + GD++LEV+G IE E K+AV + V+LK+ P++
Sbjct: 33 ISDIVKGSAAEGVSNLQPGDIILEVNGKSIE-ESHFKDAVDVLSGVETGSSVSLKIKPSV 91
Query: 458 KEKSSQLTN 484
+ S T+
Sbjct: 92 RSNGSAKTS 100
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQASHVERPEIVGLIP 667
L FKKG+ +++ D++D NWW+ E E GL P
Sbjct: 17 LNFKKGNHIEVLDKEDDNWWKGRVAETGE-EGLFP 50
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQASHVERPEIVGLIP 667
L FKKGDIL + +++ NWW+A E G+IP
Sbjct: 53 LPFKKGDILTVISKEEDNWWKARDSAGRE--GMIP 85
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQASHVERPEIVGLIPS 670
L+FKKG+ LQ+ D D +WW A + + G IPS
Sbjct: 94 LSFKKGERLQLLDNTDGDWWLAKSLSTDQ-EGYIPS 128
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 188 NGDMPIETVKVVGLRKV-PGQPLGLTVTTD-EHG-QLIVARILAGSAAAKQALVSVGDVL 358
NGD + KVV L K P Q LG ++ EHG + ++++ + S A KQ L +GD +
Sbjct: 121 NGDESM--FKVVTLVKTDPDQVLGFSIRGGREHGCGVYISQVDSDSQAEKQGL-HLGDQI 177
Query: 359 LEVDGVHIESEEQ 397
+EV+G+ E Q
Sbjct: 178 IEVNGIDFEQIAQ 190
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 479 TNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISD--RKDPNWWQASHVERPEI 652
T+K +V L+DY+P + + E L F++GDIL++ D RKD ++ + ++
Sbjct: 252 TSKWRTFV-ALYDYDPMKSSPNTNPEFELAFREGDILRVEDTSRKDGFYFGSLQDKK--- 307
Query: 653 VGLIPS 670
GLIPS
Sbjct: 308 -GLIPS 312
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 434 TLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDP 613
TL G + S+ +++ C+V L DYNP Q E+ L +KGDIL ++ D
Sbjct: 1446 TLSSGHSTMSGESEPRDRM-CFV-ALCDYNPYQQCTTGRPEMELPLRKGDILTVTGSPDS 1503
Query: 614 NWWQASHVE 640
+ ++ ++
Sbjct: 1504 RGFYSAEMD 1512
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 479 TNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISD--RKDPNWWQASHVERPEI 652
T+K +V L+DY+P + + E L F++GDIL++ D RKD ++ + ++
Sbjct: 1800 TSKWRTFV-ALYDYDPMKSSPNTNPEFELAFREGDILRVEDTSRKDGFYFGSLQDKK--- 1855
Query: 653 VGLIPS 670
GLIPS
Sbjct: 1856 -GLIPS 1860
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 167 SKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTTDEHGQL---IVARILAGSAAAKQAL 337
++E +GNGD + T++++ K LGL + L V+ IL S A+K
Sbjct: 107 NEEIEKGNGDEGVLTLEMI---KPSNGYLGLVLVGGADSPLKNHYVSDILPNSCASKCDC 163
Query: 338 VSVGDVLLEVDG 373
V +GD LLEV+G
Sbjct: 164 VRIGDELLEVNG 175
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 236 VPGQP-LGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHI 382
V QP LGLT+T + G V RI GS A K + +GD + ++G ++
Sbjct: 277 VKDQPALGLTITDNGAGCAFVKRIKEGSIADKTPQICIGDHVEYINGQYV 326
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +2
Query: 164 FSKESPEGNGDMPIETVKVVGLRKVPGQPLGLTVTT-DEHGQ---LIVARILAGSAAAKQ 331
F +E+ + + + V +++ QPLG + D G+ + V+RI GS
Sbjct: 95 FLRENDSSSDISFTQGTRAVEIKRTHNQPLGFFIRQGDGWGRKDGVFVSRITPGSLVDCD 154
Query: 332 ALVSVGDVLLEVDGVHIES--EEQLKEAVAKPNDRVTLKVGPNLKEKSSQ 475
++VGD +LEV+GV + + + P R+ L + K K SQ
Sbjct: 155 GSLAVGDEILEVNGVCLAGFRVHDVVHLIQIPK-RLILTINKEAKVKRSQ 203
>SB_11989| Best HMM Match : Ca_channel_B (HMM E-Value=1.1e-16)
Length = 319
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 500 VRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQASHVERPEIVGLIPS 670
VRT Y+ ++D P ++F+ D L + ++ + +WW V+ +G IP+
Sbjct: 51 VRTNLRYDGSEDDDSPVHGAAVSFEAKDFLHVKEKFNDDWWIGRVVKEGCDIGFIPT 107
>SB_50446| Best HMM Match : HIT (HMM E-Value=1.6e-36)
Length = 432
Score = 32.7 bits (71), Expect = 0.28
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Frame = +2
Query: 101 LERGSGIDDKLIPNEFPDLIEFSKESPEGNGDM-PIETVKVVGLRKVPGQPLGLTVTTDE 277
+E G I K+I E P I + D+ P V+ + K P + L + +DE
Sbjct: 1 MEGGDTIFGKIIRKEIPAEILHEDDQCLAFRDINPQAPTHVLVIPKKPIRQLSMADDSDE 60
Query: 278 H--GQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVAKPNDRVTLKVGP 451
G+L+ I+A AA Q L + G ++ DG ++ Q A PND+ + GP
Sbjct: 61 QLLGRLL---IVARKVAAMQNLANDGYRIIINDG---KNGGQEFGACVVPNDKEMSRSGP 114
Query: 452 NLKEKSSQLTNKLTCY 499
+++ +++ +C+
Sbjct: 115 SVRALLRDFSDRTSCH 130
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 425 DRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDR 604
+ + L + P L++ K YVR ++DY + L L+FKKGD++QI D+
Sbjct: 1496 EEIKLMISPYLRQ-----IEKEAKYVRAMYDYVTQEPNL-------LSFKKGDVIQIIDK 1543
Query: 605 KD 610
D
Sbjct: 1544 PD 1545
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 494 CYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQ 625
C + ++DY TQ LT GDI+ ++ R D WWQ
Sbjct: 563 CQCKAIYDYQATQSD-------ELTIHPGDIITVTARLDNGWWQ 599
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +2
Query: 251 LGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESE-----EQLKEAVA 415
LG+ ++ G+++V + + K V VGD LL ++ + ++++ QL +
Sbjct: 507 LGIKAGLNDSGRVVVTEVSSFGLVGKDGNVRVGDYLLSINDIKLDNKSAEEVNQLLKTCP 566
Query: 416 KPNDRVTLKVGPNLKE 463
K V K GP + +
Sbjct: 567 KGIVAVEAKAGPEVSQ 582
>SB_51269| Best HMM Match : PAE (HMM E-Value=8.9e-05)
Length = 533
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 482 NKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQASHV 637
N+++C +R N L+ K T + +L ++PNWW A+HV
Sbjct: 229 NQMSCNIRA----NSQMRYLMTSKNWSKTKRGSGMLSPQPEENPNWWNANHV 276
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 464 KSSQLTNKLTCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQISDRKDPNWWQ 625
+S K C V+ F Y P I E+ LT KGD++ + +++ WW+
Sbjct: 195 ESVMTPQKTLCIVKAKFSYQP-----IHVDELQLT--KGDLIHVLEKEGDGWWK 241
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 563 LTFKKGDILQ-ISDRKDPNWWQASHVERPEIVGLIPS 670
L+FKKG+ L+ ++D +WWQA + + VG IPS
Sbjct: 78 LSFKKGEKLEVVNDLDGGDWWQARSLVSNQ-VGYIPS 113
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQAS 631
L+FKKGDI+++ R + +WW +
Sbjct: 734 LSFKKGDIIRVFKRFNDDWWDGT 756
>SB_58405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/114 (21%), Positives = 49/114 (42%)
Frame = +2
Query: 203 IETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHI 382
++ V G + +P Q L D H R +G A+ K S+ DV + DG+HI
Sbjct: 499 VDMVATHGWKLLP-QLFYLQYRCDPHTGAWEHRKYSGQASKKSEPYSLHDVTYDDDGIHI 557
Query: 383 ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVRTLFDYNPTQDTLI 544
S+ +++ K + E+++++ N+ + + + +D L+
Sbjct: 558 ASKTSASLTEYLDLEKMA-KTASKVFEEAAEVNNETSTVEDDVLHFRDDKDKLV 610
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 548 CKEIGLTFKKGDILQISDRKDPNWW 622
C E ++ KGD++ + +R D +WW
Sbjct: 320 CAEDDVSVTKGDVVNVLNRDDDDWW 344
>SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8)
Length = 271
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 243 PGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNS 142
PGT RP + SIG +PL S + +R G +
Sbjct: 103 PGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGET 136
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 336 KACFAAALPASILATISCPCSSVVTVKPKGCPGTFLRPTT---FTVSIGISPLP 184
K CF+ + P+ PC + +T+ PK C TFL +T FT S+ +SP P
Sbjct: 509 KPCFSPSNPSPASHLSPKPCFTSLTLSPKPC-FTFLTLSTKPCFT-SLTLSPKP 560
>SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15)
Length = 347
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 243 PGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNS 142
PGT RP + SIG +PL S + +R G +
Sbjct: 132 PGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGET 165
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 554 EIGLTFKKGDILQISDRKDPNWWQASHVERPEIVGLIP 667
E +T KGD++ + ++ DP+W+ V+R G IP
Sbjct: 1904 EDDITASKGDVVTVLNKDDPDWYWV--VKRSGDEGFIP 1939
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQAS-HVERPEIVGLIPS 670
L+FK GD+++I ++ + W+ V + E +G P+
Sbjct: 289 LSFKTGDVIEIIEQNESGRWKGKIFVGKKETIGYFPA 325
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDGVHI--ESEEQLKEAVAKPNDRVTLKV 445
+ + +++ AAK + GD L+ V+G + S+E+ E + + VTL++
Sbjct: 1007 IYIKQVVKDGPAAKDGRLQAGDQLIAVNGESLIGVSQEKAAECMVRSGANVTLRI 1061
>SB_43914| Best HMM Match : IRK (HMM E-Value=5.3)
Length = 141
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 392 EQLKEAVAKPNDRVTLKVGPNLKEKSSQLTNKLTCYVR 505
EQL + N+R+ K G NLK KS+ + KL Y+R
Sbjct: 56 EQLPYQFFRENNRLVSKEG-NLKVKSTNVPKKLRLYLR 92
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 287 LIVARILAGSAAAKQALVSVGDVLLEVDGVHI 382
LIV I AG A++ + V D +LEV+G ++
Sbjct: 29 LIVREIAAGKCASRNGKLQVADRILEVNGQNL 60
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 275 EHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEEQLKEAVA-KPNDRVTLKVGP 451
E + I+ ++ + A A + GDVL+ VDG IES +Q + + K T++ P
Sbjct: 227 EMDKFIMVDVITPKSPADLAGLHKGDVLIAVDGQKIESLKQAAKLIKNKAKFSATIQRPP 286
Query: 452 NL---KEKSSQLTNKLTCYVRTLFDYNPTQD 535
+ K+K + K + NP +D
Sbjct: 287 SKMPPKDKMDGTSVKCNIVASENGNSNPDED 317
>SB_22155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 491 TCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQIS 598
T + TL YNP D + PC T K+GD ++++
Sbjct: 55 TMELNTLQSYNPQLDMITPCSHTHPT-KQGDTMELN 89
>SB_21642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 491 TCYVRTLFDYNPTQDTLIPCKEIGLTFKKGDILQIS 598
T + TL YNP D + PC T K+GD ++++
Sbjct: 55 TMELNTLQSYNPQLDMITPCSHTHPT-KQGDTMELN 89
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 DQIGKIWLERGSGIDDK--LIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVPG--Q 247
D + K+ ++R + K IP+ I GD PIE ++GLR++
Sbjct: 1091 DDLSKLGIDRLTSTPPKELCIPSPADKSIIDHNHDHLSPGDTPIELAVLMGLRRIMNNRN 1150
Query: 248 PLGLTVTTD-EHGQLIVARILAGSAAAKQALVSVGDVLLEVD 370
+ TVT D + L+ ++ SA A++ + ++L E++
Sbjct: 1151 KVVPTVTCDGQTNVLLSLSVIDPSALAEELTMIDSEMLREIE 1192
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWWQASHVERPEIVGLIPS 670
++ KKGDIL + + + +WW+ VE + G +P+
Sbjct: 867 VSMKKGDILTLLNSTNKDWWK---VETNDRQGFVPA 899
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 563 LTFKKGDILQISDRKDPNWW 622
L+F++GD L + +++D WW
Sbjct: 438 LSFREGDNLVLMEKRDDGWW 457
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 DEHGQLI-VARILAGSAAAKQALVSVGDVLLEVDG 373
D+ G+L+ + I+ AAAK + GD L++V+G
Sbjct: 462 DQSGELLQIKSIVPDGAAAKDGKLRTGDALIKVNG 496
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,521,023
Number of Sequences: 59808
Number of extensions: 402989
Number of successful extensions: 1697
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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