Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0915
         (655 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41184| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=10)               29   3.3  
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_10894| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_41184| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=10)
          Length = 252

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 21  RKYANHLEI*VLRYLRRYKSNVCPTLQSEMHYCFTAEIGRVVVPTRADSQEVLPPVK 191
           R++ N + +  L YLR   ++  P L   +H CF      V++ TR    +   P+K
Sbjct: 155 RRHENAIYVVFLGYLREAANHKTPQLSKTVHNCFCF----VIIVTRHHDYQPTEPIK 207


>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3293

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +3

Query: 51   VLRYLRRYKSNVCPTLQS--EMHYCFTAEIGRVVVPT--RADSQEVLPPVKNEDDVTR*L 218
            + R+LR+ +  + P  Q   EMH+ F +   + V+PT  +   QE  P  K  ++  R  
Sbjct: 3220 IRRHLRKTREQMQPPQQEDIEMHFHFPSRPAKPVMPTTHKQQQQEKQPSEKAPENAARMS 3279

Query: 219  PQEATTDS 242
            P    +++
Sbjct: 3280 PMSQRSNA 3287


>SB_10894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 293 EIRIARRPENPVLVSLTTIGRSFLWKSP 210
           EI I RRP   + ++L+T G  +LW+ P
Sbjct: 22  EILIWRRPRGDLAMALSTEGGIWLWRCP 49


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,727,006
Number of Sequences: 59808
Number of extensions: 373112
Number of successful extensions: 669
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)