Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0915
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-7|AAK21383.2|  361|Caenorhabditis elegans Hypothetical pr...    33   0.23 
AF038608-12|AAY86214.1|  132|Caenorhabditis elegans Hypothetical...    30   1.6  
Z74043-11|CAA98549.3|  303|Caenorhabditis elegans Hypothetical p...    28   5.0  
AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical...    28   6.7  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    28   6.7  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    28   6.7  
Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    27   8.8  

>U88173-7|AAK21383.2|  361|Caenorhabditis elegans Hypothetical
           protein F46F11.6 protein.
          Length = 361

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +2

Query: 83  RLPHPSKRNALLLHGRNRQGCGTYP-----CGLTRGPTTSK 190
           RLP P K+N +L+   N Q C T P      G+T  P+T+K
Sbjct: 30  RLPFPDKQNMMLVSWENSQICSTLPNKLHELGITELPSTAK 70


>AF038608-12|AAY86214.1|  132|Caenorhabditis elegans Hypothetical
           protein C09G12.17 protein.
          Length = 132

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 269 PVGGLSESRLD-CAANISPQCNPPNQNQLAS*NTMIRDQVT 388
           PVG ++ +  + C    S  CNPP+ N  A+ + M +DQ++
Sbjct: 54  PVGSVTTADSNGCPTVYSITCNPPDTNPTATVSMMFQDQIS 94


>Z74043-11|CAA98549.3|  303|Caenorhabditis elegans Hypothetical
           protein T19B10.10 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 579 PIHYRGTITCVSNKIKICNH 638
           P HY  T+TC+++ + +C H
Sbjct: 42  PCHYLITLTCIADMLHLCGH 61


>AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5c protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 297 RRDSDSPPTGKPGFSVTDNYRS 232
           RR   SPP G+PG  V  +YR+
Sbjct: 368 RRRRPSPPRGRPGEKVVQSYRN 389


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 297 RRDSDSPPTGKPGFSVTDNYRS 232
           RR   SPP G+PG  V  +YR+
Sbjct: 503 RRRRPSPPRGRPGEKVVQSYRN 524


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 297 RRDSDSPPTGKPGFSVTDNYRS 232
           RR   SPP G+PG  V  +YR+
Sbjct: 548 RRRRPSPPRGRPGEKVVQSYRN 569


>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 257 KPGFPVGGLSESRLDCAANISPQCNP 334
           KP +P   L + RL    +ISPQ  P
Sbjct: 128 KPNYPTNDLEQRRLKLREDISPQIEP 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,573,520
Number of Sequences: 27780
Number of extensions: 286687
Number of successful extensions: 520
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)