BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0915 (655 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.64 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.1 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.1 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 4.5 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.0 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.9 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.9 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 25.0 bits (52), Expect = 0.64 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 51 VLRYLRRYKSNVCPTLQSEMHYCFTAEIGRVVVPTRADSQEVLPPVKNEDDVT 209 +LRYL+ + + S ++IG+V + T DS+ NEDD T Sbjct: 326 ILRYLQELHVDAPTWISSVTESVLKSKIGQVFLITILDSKVSARIEMNEDDNT 378 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 24.2 bits (50), Expect = 1.1 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +2 Query: 419 TSF-LALLYQPDVNYQHFGCSHLK*FPNLF 505 T+F +A+LY+PD Y F + + +PN F Sbjct: 142 TAFSIAVLYRPDTKYMKFPAIY-EIYPNYF 170 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 24.2 bits (50), Expect = 1.1 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +2 Query: 419 TSF-LALLYQPDVNYQHFGCSHLK*FPNLF 505 T+F +A+LY+PD Y F + + +PN F Sbjct: 142 TAFSIAVLYRPDTKYMKFPAIY-EIYPNYF 170 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 22.2 bits (45), Expect = 4.5 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +3 Query: 33 NHLEI*VLRYLRRYKSNVCPTLQSEMH 113 N + + Y+ KSN+ TLQ ++H Sbjct: 37 NPINVYTKAYIYTIKSNMAKTLQFDVH 63 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 21.8 bits (44), Expect = 6.0 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 98 SKRNALLLHGRNRQGCGTYPCGLTRGPTTSKK 193 +K NA+LL GR+++ G GPT ++K Sbjct: 366 TKENAMLLSGRSQKS----TTGPPPGPTPAQK 393 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.4 bits (43), Expect = 7.9 Identities = 10/34 (29%), Positives = 12/34 (35%) Frame = +1 Query: 85 SAPPFKAKCITASRQK*AGLWYLPVRTHKRSYHQ 186 S PP +C + Q W P TH Q Sbjct: 1112 SIPPEDVRCAALTSQSLQVSWQPPPNTHSNGIIQ 1145 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.4 bits (43), Expect = 7.9 Identities = 10/34 (29%), Positives = 12/34 (35%) Frame = +1 Query: 85 SAPPFKAKCITASRQK*AGLWYLPVRTHKRSYHQ 186 S PP +C + Q W P TH Q Sbjct: 1108 SIPPEDVRCAALTSQSLQVSWQPPPNTHSNGIIQ 1141 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 177,989 Number of Sequences: 438 Number of extensions: 3653 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19804986 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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