Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0913
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   2.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 329 INGWFFGRNLKSELNSIK 382
           ++GW FG NL   + + +
Sbjct: 152 VDGWLFGDNLSERMKTTR 169


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 456 VPVSYFLTCYYIINLN 503
           +PV+    CY++I LN
Sbjct: 505 IPVTLTSVCYFMIGLN 520


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 461 WYLHILFILHYVFIVFEITVQ 399
           W L ILF L  VF+  E  VQ
Sbjct: 169 WLLSILFSLPTVFLFEEKQVQ 189


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 173 FTYIICNIYMLLI 211
           FTY +CN  + LI
Sbjct: 152 FTYYVCNTTIFLI 164


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 137 SQASLSVCLNYLFTYIIC 190
           SQ     CLN    Y IC
Sbjct: 33  SQKGQKTCLNLSINYCIC 50


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 456 VPVSYFLTCYYIINLN 503
           +PV     CY++I LN
Sbjct: 505 IPVILTSVCYFMIGLN 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,386
Number of Sequences: 336
Number of extensions: 2376
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)