Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0913
         (529 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457744-2|CAM36368.1|  169|Caenorhabditis elegans Hypothetical ...    27   8.3  
AF016451-10|AAB66006.2|  259|Caenorhabditis elegans Hypothetical...    27   8.3  

>CU457744-2|CAM36368.1|  169|Caenorhabditis elegans Hypothetical
           protein T06A10.3 protein.
          Length = 169

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 290 LKFKRCFEN*YYNLQHIIYKKHIKYHE*VTCK 195
           LK KRC     YN++H + ++ +++HE + CK
Sbjct: 53  LKLKRCS----YNMRHFLPEEELQFHE-IFCK 79


>AF016451-10|AAB66006.2|  259|Caenorhabditis elegans Hypothetical
           protein C03A7.12 protein.
          Length = 259

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 42  IYHVYSVRSLLRI*KKY-VYAICWELNF-PREDFL 140
           +Y  Y+VR+ +++ KKY  YA  W+ N  P E+ L
Sbjct: 84  VYPRYAVRNFVKVFKKYPEYAFLWKYNVQPGEEKL 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,892,211
Number of Sequences: 27780
Number of extensions: 208310
Number of successful extensions: 447
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)