Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0912
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 366 e-100
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 356 3e-97
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 236 6e-91
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 312 7e-84
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 262 4e-69
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 239 2e-67
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 241 9e-63
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 234 1e-60
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 231 2e-59
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 227 3e-58
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 209 4e-53
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 132 8e-30
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 116 4e-25
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 106 5e-22
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 99 9e-20
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 97 3e-19
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 94 3e-18
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 94 3e-18
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 91 2e-17
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 91 2e-17
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 89 7e-17
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 87 3e-16
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 83 8e-15
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 83 8e-15
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 82 1e-14
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 80 4e-14
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 79 8e-14
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 79 8e-14
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 75 2e-12
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 73 7e-12
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 73 9e-12
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 66 8e-10
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 64 3e-09
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 61 2e-08
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 42 0.015
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.059
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.078
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.10
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 39 0.14
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 37 0.41
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 0.72
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 0.96
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 36 0.96
UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3; ... 36 0.96
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 36 0.96
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 36 1.3
UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2; ... 36 1.3
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 2.2
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 35 2.2
UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole... 35 2.2
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 35 2.2
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q73TJ6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 34 2.9
UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 34 2.9
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 2.9
UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;... 34 3.9
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.1
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 5.1
UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein P0419B... 33 5.1
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.1
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 6.7
UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium ja... 33 6.7
UniRef50_Q3JNJ8 Cluster: Putative uncharacterized protein; n=10;... 33 6.7
UniRef50_A0UJZ2 Cluster: Putative uncharacterized protein precur... 33 6.7
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 33 6.7
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa... 33 6.7
UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza sa... 33 6.7
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 33 6.7
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 6.7
UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor; ... 33 6.7
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 33 8.9
UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplas... 33 8.9
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 33 8.9
UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 366 bits (900), Expect = e-100
Identities = 167/211 (79%), Positives = 188/211 (89%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYAL EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGR
Sbjct: 49 RNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGR 108
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ K
Sbjct: 109 FVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFII
Sbjct: 169 ITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFII 228
Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRIAAK 66
GKG K YISLP+GKG++L+IAEERDKR+AAK
Sbjct: 229 GKGNKPYISLPKGKGVKLSIAEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 356 bits (875), Expect = 3e-97
Identities = 159/211 (75%), Positives = 187/211 (88%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYALT +EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGR 108
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T K
Sbjct: 109 FAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+I
Sbjct: 169 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 228
Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRIAAK 66
GKG K +ISLPRGKGIRLTIAEERDKR+AAK
Sbjct: 229 GKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 236 bits (577), Expect(2) = 6e-91
Identities = 100/140 (71%), Positives = 126/140 (90%)
Frame = -3
Query: 485 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 306
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 305 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 126
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 125 RGKGIRLTIAEERDKRIAAK 66
RGKGIRLTIAEERDKR+AAK
Sbjct: 272 RGKGIRLTIAEERDKRLAAK 291
Score = 121 bits (292), Expect(2) = 6e-91
Identities = 57/72 (79%), Positives = 62/72 (86%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYALT +EV KI QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGR
Sbjct: 49 RNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGR 108
Query: 518 FTIHRITPEEAK 483
FT+HRIT EEAK
Sbjct: 109 FTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 312 bits (765), Expect = 7e-84
Identities = 143/211 (67%), Positives = 174/211 (82%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYALT EV+ I+ QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGR
Sbjct: 49 RNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F +H I EEAK+KLCKV+ + G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ K
Sbjct: 109 FRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I++FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ I
Sbjct: 169 IVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTI 228
Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRIAAK 66
GKGTK ++SLP+GKGI+LTI EE KR+A++
Sbjct: 229 GKGTKPWVSLPKGKGIKLTIIEEARKRLASQ 259
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 262 bits (643), Expect = 4e-69
Identities = 118/208 (56%), Positives = 157/208 (75%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRL YAL EV IVK R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K R
Sbjct: 49 RNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRR 108
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F + +T E+AK+KLCK+++ G +PY+VTHDGRTIRYP P ++ ND+I+L++ T K
Sbjct: 109 FCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I+DF+KF+ GN M+ GG +GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+I
Sbjct: 169 IVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVI 228
Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRI 75
GKGT+ ++LP KGI+ + ++ ++ I
Sbjct: 229 GKGTETLVNLPLDKGIKKPLLQQVNETI 256
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 239 bits (585), Expect(2) = 2e-67
Identities = 102/151 (67%), Positives = 128/151 (84%)
Frame = -3
Query: 533 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 354
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 353 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLN 174
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 173 NVFIIGKGTKAYISLPRGKGIRLTIAEERDK 81
N+F+IGKG +ISLP GKGIR TIAEE+ +
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEEKKR 226
Score = 39.9 bits (89), Expect(2) = 2e-67
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGK 618
RNRLKYALT +EV KI Q IK+DGK
Sbjct: 49 RNRLKYALTGDEVKKIRMQHFIKMDGK 75
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 241 bits (591), Expect = 9e-63
Identities = 110/211 (52%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVK 525
+ RL YAL +V I+ K++ + VDGKVR D YP G MDVV IEKT++ FR++YD K
Sbjct: 159 KERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTK 218
Query: 524 GRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 345
GRF + ++ EEAKYKL KV A GP +PY+VTHD RTIR+P+P IK+ D+++ D+
Sbjct: 219 GRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVN 278
Query: 344 TKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVF 165
KI +F ESGN+C I G N+GRVG I E+H GSFDI H+KD+ G+ FATRL N+F
Sbjct: 279 NKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIF 338
Query: 164 IIGKGTKAYISLPRGKGIRLTIAEERDKRIA 72
++G+G K++I LP G G+R TI EER ++ +
Sbjct: 339 VLGQGKKSWIELPSGDGVRETILEERKRKFS 369
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 234 bits (573), Expect = 1e-60
Identities = 107/202 (52%), Positives = 148/202 (73%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+RLKYALT E + IVK+RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGR
Sbjct: 63 RDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGR 122
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F +H I +EA +KL +V + G K +P++VTHDGRTI Y DP ++V+D+++ +I T +
Sbjct: 123 FCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGE 182
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
+ IKF+ G++ M+T G N+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+I
Sbjct: 183 VESVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVI 242
Query: 158 GKGTKAYISLPRGKGIRLTIAE 93
G+ ISLP +G+R +I E
Sbjct: 243 GENEHPLISLPAREGVRPSILE 264
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 231 bits (564), Expect = 2e-59
Identities = 109/206 (52%), Positives = 149/206 (72%), Gaps = 1/206 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RN+LKY+ E L I+K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G
Sbjct: 49 RNKLKYSTNQRESLNILKKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGH 108
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F +HRIT +E+ +KLCKV RV+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K
Sbjct: 109 FFLHRITIKESMFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
++DFIKF G+LC++ G N+GR+G ++ GS IV +KD G +F+T+ N+F+I
Sbjct: 169 VIDFIKFSIGSLCVVIKGSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVI 228
Query: 158 GKGTKAYISLPRGKGIR-LTIAEERD 84
GKGTK++ISLPR +G+R LT + E D
Sbjct: 229 GKGTKSFISLPRFRGLRTLTKSLEHD 254
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 227 bits (554), Expect = 3e-58
Identities = 107/191 (56%), Positives = 139/191 (72%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYALT +EV KI Q IKVDGK+RTD P MDV+SI+K E F LIY + R
Sbjct: 59 RNRLKYALTGDEVKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRR 118
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F +HRITPEE KYKLCK++++ K +P+LV HD T+R+PD LIKVND+IQ+D+ T K
Sbjct: 119 FALHRITPEEVKYKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGK 178
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I +KF++GNLC++TGG N GR+G I +RERHP SFD H+KD+ ++F+ +F+I
Sbjct: 179 I-TALKFDTGNLCLVTGGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVI 233
Query: 158 GKGTKAYISLP 126
KG K +ISLP
Sbjct: 234 DKGNKPWISLP 244
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 209 bits (511), Expect = 4e-53
Identities = 100/211 (47%), Positives = 137/211 (64%), Gaps = 1/211 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
RNRLKYAL E I++Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGR
Sbjct: 46 RNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGR 105
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F + ++ EA+ KL KV + T VP VTHDG IRYPDP + D+I ++ K
Sbjct: 106 FALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKK 165
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
+D IK G ++TGG N GR+G IV E HPG+F+I H+KD++G FATR N+F+I
Sbjct: 166 CVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVI 225
Query: 158 GKG-TKAYISLPRGKGIRLTIAEERDKRIAA 69
GK +++P+ +G+R+ + +ER++R+ A
Sbjct: 226 GKDLNNLQVTVPKQQGLRMNVIQEREERLIA 256
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 132 bits (319), Expect = 8e-30
Identities = 70/210 (33%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Frame = -3
Query: 689 LKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 510
L+YA E+ I+ ++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +
Sbjct: 52 LRYASNFKELSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHL 111
Query: 509 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 330
HRI+ EEA Y+L KV + + +PY+V+ G +IR+ DP I + +I++ T+K+++
Sbjct: 112 HRISSEEASYRLTKVTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIE 170
Query: 329 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 150
+I + ++ G+ GRVG +++ G + + D G+TF+ + +IG+
Sbjct: 171 YIVPGPDKVIFVSRGKARGRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGES 229
Query: 149 TK-AYISLPRGKGIRLTIAEERDKRIAAKV 63
++ +I+LP+ +GIR + E+ + ++ +
Sbjct: 230 SENIWITLPKERGIRQSELEKINAQLGEMI 259
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 116 bits (280), Expect = 4e-25
Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 10/203 (4%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKG 522
RN L YA T E K++ + +VDG VR D +P GFMDV+ + T E FR++ Y VK
Sbjct: 50 RNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK- 108
Query: 521 RFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDS 366
F +H I EE K +++ T L HDGR I R DP + + D+
Sbjct: 109 FFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDT 168
Query: 365 IQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTF 189
+ + + +I IKF G + +I GGRN+GRVG + S ++ G +V ++D++G+ F
Sbjct: 169 LLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLF 228
Query: 188 ATRLNNVFIIGKGTKAYISLPRG 120
T L+ VF+IG + ISLP G
Sbjct: 229 QTSLDYVFVIGL-DRPVISLPEG 250
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 106 bits (255), Expect = 5e-22
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK + E +I+ L+KVDGK + + GFMDV+ I E +R++Y+ +G
Sbjct: 45 RDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGA 102
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
+ + T E A KL KV+ P N L THDGRT D KV D + + K
Sbjct: 103 LVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMK 162
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFI 162
I + IK + GN IT G ++ + GTI E G S ++VH ++ F+T ++VF+
Sbjct: 163 ISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFM 218
Query: 161 IGKGTKAYISLP 126
IG +++ P
Sbjct: 219 IGSSKFSFVLSP 230
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 99.1 bits (236), Expect = 9e-20
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK A E +I+ + VDG+V D +P GFMD++ I KT E++R++ D KGR
Sbjct: 50 RDILKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGR 109
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
+++I EE KLCK+ +T + HDG+ + + V D I L + +
Sbjct: 110 LQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHE 167
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGT----IVSRERHPGSFDIVHIKDSTGHTFATRLNN 171
I + + + G +ITGG++ G +GT IV+ +P + + I++S F T +
Sbjct: 168 INEVFELKEGACVLITGGKHTGELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDY 224
Query: 170 VFIIGKGTKAYISL 129
F++G+ A ISL
Sbjct: 225 AFVVGEDAPA-ISL 237
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 97.5 bits (232), Expect = 3e-19
Identities = 48/179 (26%), Positives = 90/179 (50%)
Frame = -3
Query: 665 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 486
E K+VK + V+GK +P MD +S N+ +R++ G+ T++ I E
Sbjct: 60 EAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEK 119
Query: 485 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 306
K+CKV ++ ++T D R ++ IKV DS+ + +I+ +KFE G+
Sbjct: 120 DLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGS 179
Query: 305 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 129
LC+IT G++LG + I + ++H++ G + +++ +IG+ + +SL
Sbjct: 180 LCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 94.3 bits (224), Expect = 3e-18
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ YA T E +I+ R+I+VDG+V TD +P G MDV+ I + +R++ D +
Sbjct: 52 RDVFGYAKTMKEARRILASRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARK 111
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSI 363
I PEEA YKL +++R T HDGR + Y + K D++
Sbjct: 112 LRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDAL 171
Query: 362 QLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFA 186
+ I I+ + FE G L ++ GRN+G +G I ++ S +V ++D++G
Sbjct: 172 LITIPRQSIVSHVPFEVGTLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSR 231
Query: 185 TRLNNVFIIGK 153
T L V +GK
Sbjct: 232 TILQYVLPVGK 242
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 93.9 bits (223), Expect = 3e-18
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 10/192 (5%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LKYA E KI++ I +DG R + +PAG MDV+SI + +E + +++D GR
Sbjct: 50 RDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGR 109
Query: 518 FTIHRITPEEAKYKLCKV--KRVATGPKNVPYLVTHDGR--------TIRYPDPLIKVND 369
++ + ++ KLCK+ K V G N+ L HDGR + + + K D
Sbjct: 110 ISLKK--TDKTDVKLCKIVNKTVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGD 165
Query: 368 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTF 189
S+ + I I + F G L ITGG+++G IV E DIV +++ G F
Sbjct: 166 SVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKF 225
Query: 188 ATRLNNVFIIGK 153
T VFI+G+
Sbjct: 226 KTVKPYVFIVGQ 237
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 91.5 bits (217), Expect = 2e-17
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK E+ +I+ ++KVDG++ D +P GFMDV+SI+ + ++YD KG+
Sbjct: 46 RDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGK 105
Query: 518 FTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT 342
I + P KL K VK+ G + L HDG+TI I +D + + I
Sbjct: 106 LVIRQNAPGNKGLKLFKVVKKTIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDL 164
Query: 341 KIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVF 165
+I + +K G+ ITGG ++G + TI S E S ++V++ + F+T + +F
Sbjct: 165 EIENVLKIAEGDKVFITGGSHVGELATIKSIEVKKSSVKNMVYLNEG----FSTIKDYMF 220
Query: 164 IIG 156
++G
Sbjct: 221 VVG 223
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 91.1 bits (216), Expect = 2e-17
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ L YA E KI+ + I VDG VR +P +P G MDVV I +T + +R++ + R
Sbjct: 53 RDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHR 112
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSI 363
+ I+ EEA+ K+C++K + HDG+ + DP + V DS+
Sbjct: 113 LDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSL 172
Query: 362 QLDI------ATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDS 204
L++ + K++D I FE G GR+ G VG +V + G D++ +++
Sbjct: 173 VLELPEPDSGESWKVVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENP 232
Query: 203 TGHTFATRLNNVFIIGK 153
G F T + IGK
Sbjct: 233 EGDQFQTTKGRLIAIGK 249
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 89.4 bits (212), Expect = 7e-17
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R + A +EV KI+ QR + V+G+ D G D+VSI K + +R+ DVKG
Sbjct: 44 REHIGLAQNASEVKKILHQRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGN 103
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT- 342
I E AK +LCK++ T L G + D K DS+ + + T
Sbjct: 104 LVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDG 162
Query: 341 ----KIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATR 180
+I+D + GN+ MI GG++ G+VG IV R S ++ DS G F T
Sbjct: 163 EDRFRIVDHFPYAEGNVAMIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETI 222
Query: 179 LNNVFIIGKGTKA 141
VF++G+ A
Sbjct: 223 EEYVFMVGRSAIA 235
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 87.4 bits (207), Expect = 3e-16
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ YA T E I+ + +KVDGKVR D YP G MDV+ + NE +R+I D
Sbjct: 44 RDVFHYAKTLREARLIIGKGYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNF 103
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIA 348
RI EA K+C+++ L HDGR I + + S+ +++
Sbjct: 104 LRPIRIDKSEAGVKVCRIEDKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLE 163
Query: 347 TTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNV 168
K+MD+ + + G N+GR GT+++ R D + + F T LN +
Sbjct: 164 DGKLMDYYPMQPNQYVIAFNGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYL 223
Query: 167 FIIGK 153
+IGK
Sbjct: 224 LVIGK 228
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 82.6 bits (195), Expect = 8e-15
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Frame = -3
Query: 689 LKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 510
LK T E +I+ + VDGKVR D YP G MDVV I + R+I D T
Sbjct: 47 LKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTT 106
Query: 509 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIAT 345
I+ E+AKYK ++ T V L DGR I + L + N ++++++
Sbjct: 107 INISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPE 166
Query: 344 TKIMDFIKFESGNLCMITGGRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFATRLN 174
KI + G MI GGRN G G I + ++ + +V ++ G TF T L
Sbjct: 167 QKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLI 226
Query: 173 NVFIIGK 153
NV IG+
Sbjct: 227 NVMAIGE 233
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 82.6 bits (195), Expect = 8e-15
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK E +I+ + + VDG R D +P G DV+++ NE +R++ D KGR
Sbjct: 44 RDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGR 103
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
++++ E KLC++ T L +DG I + DS+ L I
Sbjct: 104 LVLYKLN-ETNVNKLCRINNKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKH 161
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVS-RERHPGSFDIVHIKDSTGHTFATRLNNVFI 162
++ +KFE GNL M+ GG++ G G I+ RE + V I T F T + V +
Sbjct: 162 VVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIV 219
Query: 161 IGK 153
IG+
Sbjct: 220 IGE 222
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 81.8 bits (193), Expect = 1e-14
Identities = 55/186 (29%), Positives = 87/186 (46%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK A +E+ KI+ + + VDGKVR D Y G D +SI N +R++ + G+
Sbjct: 46 RDLLKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGK 105
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
F H + +A K+CK+ L HDG T+ + K DS+ L + K
Sbjct: 106 F--HLVPVTDASAKICKIVNKTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERK 162
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
I + G+L M+T G++ G +G + + S + + F T VF+I
Sbjct: 163 IDQHFTYAVGSLVMVTEGKHSGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVI 222
Query: 158 GKGTKA 141
GK + A
Sbjct: 223 GKDSPA 228
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 80.2 bits (189), Expect = 4e-14
Identities = 52/151 (34%), Positives = 79/151 (52%)
Frame = +3
Query: 129 QRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQV 308
+RD RL A D EHV + R + ++ GVL VHN EG + LA D V + DH Q
Sbjct: 43 KRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHPDATGVVTTGDHAQS 102
Query: 309 PRLKLDEVHNLRSCDV*LDGIVDFDKWVWVADGAAIMRYQVRNILRSGRHTLDFTQLVLS 488
++LD + +L DV +G+ D + V +GAA+++ R+ L QLVL
Sbjct: 103 ADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLR 162
Query: 489 LLRGDTVDCESALNIID*TKQFISLLN*DNI 581
D V ES+L ++D + FI+L + D++
Sbjct: 163 FDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 79.4 bits (187), Expect = 8e-14
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LKYA T +E I+ + +KVDG VR D +P G MDV+ I T E++R++ D
Sbjct: 45 RDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKY 104
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIA 348
+ + I+ EEA KL +V+ L HDGR T IK DS+ D+
Sbjct: 105 YNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLR 164
Query: 347 TTKIMDFIKFESGNLCMITGGRNLGRVGTI 258
I I + G ++ G N+G GT+
Sbjct: 165 NKAIKAHIPLKLGVNAVVIHGSNVGFSGTL 194
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 79.4 bits (187), Expect = 8e-14
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ LK E+ +I+ L+ VDGKV + GFMD +++ + L + YD KG+
Sbjct: 45 RDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGK 102
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
I E KL +VK + HDG T+ IK DS+ + I +
Sbjct: 103 LVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKE 162
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFI 162
I+D +KF GN ITGG ++G + TI S E + ++VH+ + F+T + VF+
Sbjct: 163 IVDVLKFAPGNRVFITGGSHVGEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFV 218
Query: 161 IGKGTKAYISLP 126
+G K S+P
Sbjct: 219 MG-SPKYTFSMP 229
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/136 (30%), Positives = 72/136 (52%)
Frame = -3
Query: 665 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 486
E +++ + + VDG R D +P G MD+++I N +R++ D K R ++++ A
Sbjct: 56 EAKRVLSEGNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGA 115
Query: 485 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 306
KLC+++ + + + +DG I + DSI L + K++ IK+E GN
Sbjct: 116 D-KLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY-NTKDSIILSVPDKKVVKHIKYEVGN 173
Query: 305 LCMITGGRNLGRVGTI 258
L MI GG + G VG+I
Sbjct: 174 LAMIVGGSHAGEVGSI 189
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 72.9 bits (171), Expect = 7e-12
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ L A E +++ R + VDG++ TD G MDV+++ + + FR I DV G+
Sbjct: 46 RDVLDLAHNLREAKRMLATRQVLVDGRIETDLGRGVGLMDVLTVGEDS--FRCILDVNGK 103
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATT 342
I+ + A KLC+V +T + HDGR I D L D++ + +
Sbjct: 104 LRYRSISDKAAASKLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQ 163
Query: 341 KIMDFIKFESGNLCMITGGRNLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVF 165
+ F G +TGG ++G +VSR+ + + V D F T + VF
Sbjct: 164 SVAGHHPFSKGATAYLTGGSHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVF 218
Query: 164 IIG 156
IIG
Sbjct: 219 IIG 221
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 72.5 bits (170), Expect = 9e-12
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ L A EV ++ + VDG+ D +P G DV++I + NE +R++ D +G+
Sbjct: 50 RDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGK 109
Query: 518 FTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT 342
+ +I EEA K K +++V+ + Y +T DGRT D K + + +I
Sbjct: 110 LYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNF 167
Query: 341 KIMDFIKFESGNLCMITGGRNLGRVGTI 258
KI + I E I G++ GR+G I
Sbjct: 168 KIREVIPLEKDRKAYIIRGKHTGRIGVI 195
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 66.1 bits (154), Expect = 8e-10
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ +++AL EV KI+ R + ++G + TD D++S K ++ + ++ D KGR
Sbjct: 43 RDHMQFALNTKEVRKILHDRQVLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGR 102
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA--- 348
+ I+ + AK +L KV T + G + K DS+ + IA
Sbjct: 103 HNEYEISADAAKLQLVKVANKTTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDD 161
Query: 347 TTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNN 171
+ + GN+ +I GG++ + G +V S + V I+D+ G+ F T +
Sbjct: 162 RFAVQQHFPYAVGNMAIIIGGQHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDY 221
Query: 170 VFIIG 156
V++IG
Sbjct: 222 VYMIG 226
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/147 (27%), Positives = 66/147 (44%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ L T E K + ++VDG RT + G MDVV + T +++R++
Sbjct: 50 RDTLGAVSTLREAKKSIYSGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAI 109
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
+I E K+C+V + + HDGR++ D + V DS + + K
Sbjct: 110 LKPVKIEAAEKDRKICRVTSKTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQK 168
Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTI 258
I+ + E G ++T G N G GTI
Sbjct: 169 ILKVARMEKGAHAVVTRGTNAGSTGTI 195
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
Frame = -3
Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
R+ L YA E + + + ++GK +D P G D+++ + E +R+ GR
Sbjct: 44 RDVLGYADNRKEARYALNEDNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGR 103
Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATT 342
+ I P+ A+ KL K+ L HDG T I D DSI +
Sbjct: 104 LALTAIDPDAAQSKLGKIVTKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDG 163
Query: 341 KIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVF 165
+++ ++E G L G + G VG + + PGS + V + G F T V
Sbjct: 164 EVVAHFEYEEGALVTAVDGAHAGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVV 223
Query: 164 II 159
+I
Sbjct: 224 VI 225
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +3
Query: 69 GCDALVPXXXXXXXXXXXXRQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSL 248
GC L+ R+R RL LA+ EH+ Q + + G+L+V ++G + L
Sbjct: 89 GCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVLL 148
Query: 249 AGHDGAHTPQVTASRDHTQVPRLKLDEV 332
D ++T V ++ H +P +K DEV
Sbjct: 149 PVLDDSNTAPVPSTSHHDNIPNIKFDEV 176
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -2
Query: 216 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 52
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+ V
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQSGV 77
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 39.9 bits (89), Expect = 0.059
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 264 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 91
H VP R + RH A Q H H R EQR R+G L GHP H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 90 AGQAHRSQGRRAVGLR 43
Q HR +G+RA G R
Sbjct: 171 -RQEHRQRGQRAGGQR 185
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 39.5 bits (88), Expect = 0.078
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -3
Query: 665 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKG 522
E L I KQ+ +KV+ K + DPT+P D SIE +++ L+ + KG
Sbjct: 126 EELDINKQQKVKVEHKKQLDPTFPRNDFDKFSIEDMDQVLNLLSNYKG 173
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -2
Query: 183 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRGA 88
E Q+VH R+ G E +HL + HPPHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 38.7 bits (86), Expect = 0.14
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -2
Query: 270 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 94
C HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL 112
Query: 93 GAGQAHRSQGRRAVG 49
Q H +G +G
Sbjct: 113 ---QHHEHEGIMKMG 124
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 74 RCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-RRCVPWSP*CAQCRRSRDVSR 250
RC P R CP R ARC CP R RC RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 251 GTRWCP 268
R P
Sbjct: 70 ARRARP 75
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +2
Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQC-RRSRDVSRG 253
C P R CP R ARC CP R RC RC P A+C +
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARCPA---RCPARCP--ARCPAHCPNNGAA 61
Query: 254 TRWCPHA 274
RW P A
Sbjct: 62 RRWRPAA 68
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHPPHHRRGAGQAHRSQ 67
H HQG HG H H +Q+VH+ GH +H L QGH HH SQ
Sbjct: 41 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHHDHHGHHGQHSQ 94
Score = 36.7 bits (81), Expect = 0.55
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 76
H HQG HG H H H+ QGH G H QGH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 213 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 52
Q +HG H H Q GH+G H GH HH H ++ V
Sbjct: 6 QVIHGHHGHHH-HQGHQGHHGHQGHHHHQGHHGHHGHHHHQGHHGHHGHHQQQV 58
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 36.3 bits (80), Expect = 0.72
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = -2
Query: 234 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 55
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARR- 52
Query: 54 VGLR 43
GLR
Sbjct: 53 -GLR 55
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 36.3 bits (80), Expect = 0.72
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 216 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 55
H G+ H H +Q+ H+ GH H + G PHHR S GR++
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRKS 338
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 0.96
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +2
Query: 107 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 265
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 266 PHAPSYGL 289
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 35.9 bits (79), Expect = 0.96
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = -2
Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV----HNRQGHEGVHLAAARQGHPPH-- 103
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 102 --HRRGAGQAHRSQGRRA 55
HRR G+AH+ GRRA
Sbjct: 325 QPHRRLPGRAHQQCGRRA 342
Score = 33.9 bits (74), Expect = 3.9
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = -2
Query: 267 GHHRVPRETSR---LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH-LAAARQG-HPPH 103
G R PR SR R +G G R +R H G G A R G HP
Sbjct: 92 GRGREPRRRSRGGTRRRGRGGRGGRGGTRRRPCRERSHRGAGRRGRRGTARGRHGAHPGR 151
Query: 102 HRRGAGQAHRSQGRRA 55
RR G+AHR RR+
Sbjct: 152 RRRHRGRAHRRHRRRS 167
>UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 928
Score = 35.9 bits (79), Expect = 0.96
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Frame = -2
Query: 192 LRHEVEQRVHNRQGHEGVHLAA--ARQGHPPHHRRGA-------GQAHRSQGRRAVGLRT 40
L H V +H+R G G H + AR PP HR+G G++ R Q RRA+ L T
Sbjct: 412 LLHRVLLELHDRNGSGGAHRQSSPARGETPPRHRQGTDAAVAAPGESERQQSRRAMRLLT 471
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 35.9 bits (79), Expect = 0.96
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH-HRRGA--GQAHR 73
H H G H +H ++ VH Q H+ GVH A Q HP H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 52
H HQG HG H H + GH G H GH HH H ++ V
Sbjct: 116 HHHHQGHHGHHGHHHHQ----GHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQV 169
Score = 33.9 bits (74), Expect = 3.9
Identities = 25/100 (25%), Positives = 33/100 (33%)
Frame = -2
Query: 366 HPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLR 187
H H + + HQ + H + G GHH H HG H
Sbjct: 118 HHQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVHHHGHHHI 177
Query: 186 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 67
H QGH+G H GH HH + + Q + Q
Sbjct: 178 HPQAILYQTHQGHQGHHDHHGHHGHQGHHGQHSQQHQQHQ 217
>UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 711
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 183 EVEQRVHNRQGHEGVHLAAARQGH--PPHH-RRGAGQAHRSQGRRAVG 49
E EQR + +GH+ R+ H P HH G G+ HR++ R AVG
Sbjct: 236 EQEQRFEHDEGHDDRRRDQRREAHDLPQHHVGHGGGEQHRARHRDAVG 283
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 35.1 bits (77), Expect = 1.7
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = -2
Query: 255 VPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 76
VPR+ SR L A + G + H+V+ R G EG A A G P HR G QA
Sbjct: 527 VPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQHRMGVRQAE 581
Query: 75 RSQGRRA 55
+ G A
Sbjct: 582 QRLGASA 588
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 198 THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 67
TH H+ +H+ Q H G +Q H HH G H SQ
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQ 472
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 226
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 149 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 199
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 226
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 275 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 325
Score = 33.1 bits (72), Expect = 6.7
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 50 PTARRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCR 229
PT R C CP R C C RC SC C C T + RC + CR
Sbjct: 152 PTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSCRCPTSCWCPT-YCRCPTYCRCPTSCR 210
Query: 230 RSRDVSRGTR-WCP 268
T WCP
Sbjct: 211 CPTSCWCPTYCWCP 224
Score = 33.1 bits (72), Expect = 6.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 PTARRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQ 223
PT+ R C CP R C C + C C C RC TS RC W P
Sbjct: 164 PTSCRCPTSCWCPTYCRCPTSCRCPTSCWCPTYCRCPTYCRCPTSC-RCPTSCWCPTYCW 222
Query: 224 CRRSRDVSRGTRWCP 268
C S WCP
Sbjct: 223 CPTSCWCPTYC-WCP 236
>UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4487,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 258
Score = 34.7 bits (76), Expect = 2.2
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -2
Query: 228 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQGRRA 55
R H G HL E R G G A RQ PPH RR AG+ RSQG R
Sbjct: 152 RRLEHGGGPRLHLE-PAESEAAARTGRGGDRRARGRQRAQLPPHTRRPAGRYRRSQGWRH 210
Query: 54 VG 49
+G
Sbjct: 211 LG 212
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 291 GRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG-VHLAAARQ 118
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 117 GH 112
H
Sbjct: 377 AH 378
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 34.7 bits (76), Expect = 2.2
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -2
Query: 384 YQSQRFHPVRHRNYEDYGLHQV*VWELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 211
+ + + HP+R Y G+ V +LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 210 GLHGTHLRHEVEQRVHNRQGHE 145
G+ L+H++EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 511
Score = 34.7 bits (76), Expect = 2.2
Identities = 34/89 (38%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Frame = -2
Query: 291 GRP*LGA--CGHHRVPRETSRLLRHCAHQ-G----LHGTHLRHEVEQRVHNRQ----GHE 145
GR LG GHHR H HQ G LH +R QRV + Q +
Sbjct: 82 GRTHLGREQLGHHRAEHAEEHGHEHADHQLGDQQLLHRGAVRQPGIQRVEHHQVADQRAD 141
Query: 144 GVHLAA--ARQG----HPPHHRRGAGQAH 76
G H AA RQG H HH+RGAG H
Sbjct: 142 GQHAAAHAVRQGAEERHDHHHQRGAGHLH 170
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = -2
Query: 267 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGA 88
G R R H H H H RH ++ H+R H+ R GH H R
Sbjct: 509 GRRRRDRHRRDHRHHDRHHRDHRHHDRHHRDRHRHDRHRHDRRLHDRHRHGHHRHGHRLR 568
Query: 87 GQAHRSQGRRAVGL 46
G H + R GL
Sbjct: 569 GHRHHDRRPRGHGL 582
Score = 33.5 bits (73), Expect = 5.1
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAAR-QGHPPHHRRGA 88
HHR R R H H+ H H RH ++R+H+R H G H R +GH H RR
Sbjct: 526 HHRDHRHHDR---H--HRDRH-RHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRRPR 578
Query: 87 GQAHRSQGRR 58
G RR
Sbjct: 579 GHGLHRHDRR 588
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.2
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = +1
Query: 283 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 462
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 463 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 591
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 34.7 bits (76), Expect = 2.2
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = -2
Query: 375 QRFHPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRV-PRETSRLLRHCAHQGLHG 199
Q HP+ H+++ H + +L++ P HH + P + + L H HQ LH
Sbjct: 64 QHHHPI-HQHHHHTHQHPHHIRQLLHHIHLP-----HHHTLQPPQVTVQLHHHIHQHLHH 117
Query: 198 TH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 94
TH L H + Q + Q H +H PHH R
Sbjct: 118 THQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_Q73TJ6 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium avium subsp. paratuberculosis|Rep:
Putative uncharacterized protein - Mycobacterium
paratuberculosis
Length = 381
Score = 34.3 bits (75), Expect = 2.9
Identities = 45/129 (34%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Frame = -2
Query: 426 GNA*WPHHPLPRPTYQSQRFHPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPR 247
G A PH P + QR R RN G HQ V RP GA G R+ +
Sbjct: 140 GRARRPHCPADGDDLR-QRRRLGRARNR--LGRHQQRAARRVGGPPRPAGGAGGPRRLGQ 196
Query: 246 ETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV---HLAAARQGHPPHHRRGAGQAH 76
RH + H R QR H R+ H GV H AR P H+ GAG
Sbjct: 197 H-----RHARQRARPKRHAR----QRGHERRRHAGVRGDHHGPARD--PRRHQAGAGSPS 245
Query: 75 RSQGRRAVG 49
R + RRAVG
Sbjct: 246 R-RARRAVG 253
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 34.3 bits (75), Expect = 2.9
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = -2
Query: 216 HQGLHGTHLRHEVEQRVHNRQGHEGV---HLAAARQGHPPHHRR-GAGQAHRSQGRRAVG 49
HQ R V +R GH+G H+AA G P HHRR G + R+ GRR VG
Sbjct: 1828 HQPERQRARRRRVGLGARHRHGHDGAARRHVAALPPG-PRHHRRDGQPRRPRAGGRRRVG 1886
Score = 33.9 bits (74), Expect = 3.9
Identities = 37/125 (29%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
Frame = -2
Query: 408 HHPLPRPTYQSQRFHPVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGH--------HRV 253
H R +++R RHR G HQ + D GR GH HR
Sbjct: 2934 HRHRHRRVGRARRRAGQRHRRGSRIGRHQRGARD---DDGRDRRRRVGHRDGRRHRGHRR 2990
Query: 252 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 73
R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2991 RRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRGRRHPRA 3049
Query: 72 SQGRR 58
RR
Sbjct: 3050 GDERR 3054
>UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 1338
Score = 34.3 bits (75), Expect = 2.9
Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -2
Query: 276 GACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQ-GHEGVHLAAARQGH-PPH 103
G G R H H+G G+ LR R R G EG AA R+ H PP
Sbjct: 943 GRAGRDGADRRRRAERAHARHRGAGGSRLRRH---RGGGRAVGPEG---AAIRRAHRPPD 996
Query: 102 HRRGAGQAH-RSQGRR 58
HR GA + H R GRR
Sbjct: 997 HRCGAARRHERPAGRR 1012
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -2
Query: 264 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHHRR 94
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTH 182
Query: 93 GAGQAHRSQ 67
Q + Q
Sbjct: 183 QQQQQQQQQ 191
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 189 RHEVEQRVHNRQGHEGVHLAAARQ-GHPPHHRRGAGQAHRSQGRR 58
R E E+R ++ G + +R+ GH HHR G+G+ HR RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 444
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRG 91
HH E H H+ H +H E + ++ GHE H +G H HH+
Sbjct: 278 HHHGHHEDHHHSHHQDHKHHHHEEHKHGHEHKEEHKHGHEHKHHHDHHEGHHHHEHHKHH 337
Query: 90 AGQAHR 73
A H+
Sbjct: 338 ASHEHK 343
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 234 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 94
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -2
Query: 261 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 82
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 81 AH 76
H
Sbjct: 374 EH 375
>UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein
P0419B01.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0419B01.9 - Oryza sativa subsp. japonica (Rice)
Length = 123
Score = 33.5 bits (73), Expect = 5.1
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Frame = +2
Query: 116 PC-RAAARCTPSC---PCRL*TR-------CSTSWRRCV-PWSP*CAQ--CRRSRDVSRG 253
PC RAAA C P C PCR R C + CV P SP CA CRR R R
Sbjct: 41 PCVRAAAPCVPPCTSRPCRRPRRHLRPPSACVRAAALCVPPSSPPCASRPCRRPRHRLRP 100
Query: 254 TRWCPHA 274
C HA
Sbjct: 101 PAACVHA 107
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVE-QRVHNRQGHEGVHLAAARQGHPPHHRR 94
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 64
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 428 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 294
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr0146 protein - Bradyrhizobium
japonicum
Length = 530
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -2
Query: 213 QGLHGTHLRHEVEQRVHNRQGH----EGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 55
+G+HG H + RV +RQG +G+ AA RQ P H RG + R + + A
Sbjct: 371 EGVHGRHHHQRLPGRVRHRQGRPVAVQGL-CAAFRQRRLPLHLRGTAEVDRERAQCA 426
>UniRef50_Q3JNJ8 Cluster: Putative uncharacterized protein; n=10;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 1311
Score = 33.1 bits (72), Expect = 6.7
Identities = 25/71 (35%), Positives = 30/71 (42%)
Frame = -2
Query: 267 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGA 88
G HR R + LR H G H+R VE R R GV R+ R
Sbjct: 1140 GRHRHVRRLAPALRAADHAGRQRGHVRRAVEPRA-ARALERGVERLLRRR------TRRI 1192
Query: 87 GQAHRSQGRRA 55
GQAH ++G RA
Sbjct: 1193 GQAHHARGERA 1203
>UniRef50_A0UJZ2 Cluster: Putative uncharacterized protein
precursor; n=4; Burkholderia|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 834
Score = 33.1 bits (72), Expect = 6.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = -2
Query: 270 CGHHRVPRETSRLL-----RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPP 106
C HR P E + R A + +R E ++ H+ H+ + + Q P
Sbjct: 577 CQMHRRPEEADAVQEAEEQRRIAERRQRAARIRDEEDKEDHDV--HDMLAVVVGAQQRPD 634
Query: 105 HHRRGAGQAHRSQGRRA 55
RGAG+AH ++ +RA
Sbjct: 635 QQHRGAGRAHHAREQRA 651
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 216 HQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 73
HQG+HG + H ++ + + H+G+H + GH H+ G G H+
Sbjct: 154 HQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQ 203
>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0441900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 444
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRS 235
C+CP C A C+ C C T+C + C P C +C+ S
Sbjct: 337 CSCPRCSSCFNIFKCSCAGCCSSLCKCPCTTQCFSCQSSCCKRQPSCCKCQSS 389
>UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza
sativa|Rep: OSIGBa0152K17.10 protein - Oryza sativa
(Rice)
Length = 444
Score = 33.1 bits (72), Expect = 6.7
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 243 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 213 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 58
QG G H++H+ E ++QGH +QG ++G GQ + QG++
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQ--GQQQGQGQGQQGQGQQ 1256
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -2
Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGAGQAH 76
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 97 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHHH 148
>UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor;
n=2; Plasmodium lophurae|Rep: Histidine-rich
glycoprotein precursor - Plasmodium lophurae
Length = 351
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85
HH P E H H H H E + H H H HPPHH G
Sbjct: 62 HHHHPEE-----HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLG 116
Query: 84 QAH 76
H
Sbjct: 117 HHH 119
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 549 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVXGQSILQTI 695
Q I+ N +NI + I + N P E LFH F DFV G ++ I
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGI 98
>UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplasmic
component-like; n=1; Delftia acidovorans SPH-1|Rep:
ABC-type Fe3+ transport system periplasmic
component-like - Delftia acidovorans SPH-1
Length = 674
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = +2
Query: 59 RRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCR 229
RR W PAP R C RAAARC C R RC S R +P CA R
Sbjct: 12 RRKWAMWPMPAPAR----C-ARAAARCWAWCCPRSPIRCLPSACRALPRRRRCAAMR 63
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 195 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR---RGAGQAHRSQGRRAVGLRTIN 34
H + + +Q+ H++Q H+AAA+Q HH A QAH + A+ N
Sbjct: 508 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAAN 564
>UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 196
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -2
Query: 228 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 61
+H +H HG H E + H+ GH H GH H G H +GR
Sbjct: 76 KHESHH-FHGLHFHPEHQFGGHHFGGHHHHHGGHHHHGHHHGHHHGGHHGHHFEGR 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,281,769
Number of Sequences: 1657284
Number of extensions: 15879142
Number of successful extensions: 55212
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 51158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54904
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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