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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0912
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal pro...   295   2e-80
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    39   0.003
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    33   0.15 
U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL110490-13|CAB54454.1|  377|Caenorhabditis elegans Hypothetical...    29   3.2  
AL110490-12|CAB54447.1|  326|Caenorhabditis elegans Hypothetical...    29   3.2  
Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta...    28   5.6  
U23523-9|AAC46564.1|  147|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF209707-1|AAF28335.1|  522|Caenorhabditis elegans phosphoinosit...    27   9.8  
AC006708-6|AAF60427.2|  522|Caenorhabditis elegans Phosphoinosit...    27   9.8  

>AC024780-6|AAF60569.1|  259|Caenorhabditis elegans Ribosomal
           protein, small subunitprotein 4 protein.
          Length = 259

 Score =  295 bits (724), Expect = 2e-80
 Identities = 138/211 (65%), Positives = 166/211 (78%)
 Frame = -3

Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519
           RNRLKYAL   E  KI+ QR+++VDGKVRT   +P GFMDVV+IE+TNE FR++YD KGR
Sbjct: 48  RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGR 107

Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339
           + +HRI   EA +KLCKVK V T  K VP L T DGRTIRYPDP +KVND+I  +I+T K
Sbjct: 108 YVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQK 167

Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159
           I D +KFE GNL  +TGGRN+GRVG I  RER PG+ DI+HIKDS GH+FATR++NVF+I
Sbjct: 168 ITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVI 227

Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRIAAK 66
           GKG KA +SLP G GIRL+IAEERDKR+A K
Sbjct: 228 GKGNKALVSLPTGAGIRLSIAEERDKRMAQK 258


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 22/65 (33%), Positives = 26/65 (40%)
 Frame = -2

Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85
           HHR   E        AH G HGTH  H  E   H+   H G H +     H P H    G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459

Query: 84  QAHRS 70
           + H +
Sbjct: 460 EHHHA 464



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -2

Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 100
           HH    E      H  H G HGTH  H          GH G  H A A  GH  HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580



 Score = 37.9 bits (84), Expect = 0.007
 Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
 Frame = -2

Query: 273 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 97
           A  HH    E      H  H G HGTH  H          GH G  H A A  GH  H  
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521

Query: 96  RGAGQAHRSQGRRA 55
            G    H  +   A
Sbjct: 522 HGTHHGHHGEHHHA 535



 Score = 35.1 bits (77), Expect = 0.049
 Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = -2

Query: 225 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 76
           H AH   HG H RH  E    H+   H G H       H  HH   A   H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441



 Score = 35.1 bits (77), Expect = 0.049
 Identities = 28/115 (24%), Positives = 36/115 (31%), Gaps = 2/115 (1%)
 Frame = -2

Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACG-HHRVPRETSR 235
           HH      +  +  H P  H ++ ++G H          H     G  G HH  P     
Sbjct: 462 HHAPAHHGHHGEHHHAPAHHGHHGEHGTHH---GHHGSHHSPAHHGHHGEHHHAPAHHGH 518

Query: 234 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 70
              H  H   HG H  H      H   G  G H       H P H    G+ H +
Sbjct: 519 ---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 570



 Score = 35.1 bits (77), Expect = 0.049
 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
 Frame = -2

Query: 294 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 124
           HG    G+ G H     T   L H  H G HGTH    H      H+   HE G H  A 
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAH 702

Query: 123 RQGHPP---HHRRGAGQAH 76
              H     HH  G    H
Sbjct: 703 HGHHDDKENHHHHGHHSKH 721



 Score = 33.9 bits (74), Expect = 0.11
 Identities = 27/115 (23%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
 Frame = -2

Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRL 232
           HH      +  +  H P  H ++ ++G H     E  + H     G  G H         
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGE--HHHAPAHHGHHGEHGTHHGHHGS 554

Query: 231 LRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 67
               AH G HG H         H   G  GVH     + H   H   A   H  +
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608



 Score = 33.5 bits (73), Expect = 0.15
 Identities = 20/67 (29%), Positives = 20/67 (29%)
 Frame = -2

Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85
           HH  P           H G HG H  H          GH G H       H P H  G  
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689

Query: 84  QAHRSQG 64
            AH   G
Sbjct: 690 GAHHEHG 696



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 30/117 (25%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
 Frame = -2

Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELV-YDHGRP*LGACGHH--RVPRET 241
           HH      +  +  H P  H ++  +G H V       + HG       GHH        
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHG 614

Query: 240 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 76
                + AH G HG H  H      H   G  H G H      GH   H   A   H
Sbjct: 615 HHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669



 Score = 32.3 bits (70), Expect = 0.34
 Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
 Frame = -2

Query: 264 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 97
           HH    E      H  H G HG+    H  HE     H+   H G H       H  HH 
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617

Query: 96  RGAGQAHRSQG 64
            G G  H   G
Sbjct: 618 AGYGAHHGHHG 628



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
 Frame = -2

Query: 219 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 55
           AH G HG H  H      H+      GH G H      GH   H   A   H  +   A
Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
 Frame = -2

Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 88
           HH  P        H      HG H  H          GH G H + A  G H  HH   A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514

Query: 87  GQAHRSQ 67
              H  +
Sbjct: 515 HHGHHGE 521


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = -2

Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 64
           HC   G HG H       R H   G  G      R GH  PPHH    G++    G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414



 Score = 29.5 bits (63), Expect(2) = 0.36
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 225 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 100
           HC    G HG    H  + R  +R GH   H    R   PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430



 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = -2

Query: 210 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 61
           G HG H RH         R GH G     +R G P       G  H   GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333



 Score = 21.4 bits (43), Expect(2) = 0.36
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 111 PPHHRRGAGQAHRSQGRRA 55
           PPH R G    H   G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468


>U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical
           protein C48B6.4 protein.
          Length = 623

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = -3

Query: 524 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 393
           G+  + R+T  E  Y+ CK+++ A   K VP     Y+V H  R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 77  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 86  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 77  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 84  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 77  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 85  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +2

Query: 77  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196
           C C  PR     C CR    C  +C C   TRC T  R C
Sbjct: 86  CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119


>AL110490-13|CAB54454.1|  377|Caenorhabditis elegans Hypothetical
           protein Y48B6A.13b protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 306 LVYDHGRP*LGACGHHRVPRETSRLLRH 223
           LV+D GR  +G+    R  RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234


>AL110490-12|CAB54447.1|  326|Caenorhabditis elegans Hypothetical
           protein Y48B6A.13a protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 306 LVYDHGRP*LGACGHHRVPRETSRLLRH 223
           LV+D GR  +G+    R  RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183


>Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical
           protein T04C10.4 protein.
          Length = 208

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 408 HHPLPRPTYQSQRFHPVRHRNYEDYGLH 325
           HH    PTY    F+P  H++Y+ + L+
Sbjct: 32  HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 113 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 202
           C C+ A  C P CP   + + CS T  R C+P
Sbjct: 54  CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = -2

Query: 240 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 64
           +R  RH  H+G HG  ++H           H   H    R G H P+        H  + 
Sbjct: 84  ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143

Query: 63  RRAV 52
           +R++
Sbjct: 144 KRSI 147


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 77  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196
           C C  P+     C CR    C  +C C   TRC T  R C
Sbjct: 85  CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118


>AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta
            family protein 5 protein.
          Length = 938

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 367  ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 531
            E  ++ +  G   V P C   Y     PVA  +  H  Y A + ++R   N P T
Sbjct: 868  EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921


>U23523-9|AAC46564.1|  147|Caenorhabditis elegans Hypothetical
           protein F53A9.9 protein.
          Length = 147

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 168 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 73
           VH+   H+G H    R+ H  HH    G  H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146


>U23523-6|AAC46561.1|   86|Caenorhabditis elegans Hypothetical
           protein F53A9.6 protein.
          Length = 86

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = -2

Query: 216 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 91
           H G   TH  H+      +  GH G H  +  + H  H   G
Sbjct: 43  HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84


>AF209707-1|AAF28335.1|  522|Caenorhabditis elegans phosphoinositide
           3-kinase adaptersubunit protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 118 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 234
           L  G+EM    P  +   L ++  K  P + LMC  SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338


>AC006708-6|AAF60427.2|  522|Caenorhabditis elegans Phosphoinositide
           kinase adaptersubunit protein 1 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 118 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 234
           L  G+EM    P  +   L ++  K  P + LMC  SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,455
Number of Sequences: 27780
Number of extensions: 365489
Number of successful extensions: 1213
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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