BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0912 (700 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 295 2e-80 AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.003 AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.15 U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 1.8 Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.4 U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.4 U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.4 AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 29 3.2 AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 29 3.2 Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.2 Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 5.6 U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.6 AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 28 5.6 U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 9.8 U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 9.8 AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 9.8 AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 9.8 >AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal protein, small subunitprotein 4 protein. Length = 259 Score = 295 bits (724), Expect = 2e-80 Identities = 138/211 (65%), Positives = 166/211 (78%) Frame = -3 Query: 698 RNRLKYALTXNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 519 RNRLKYAL E KI+ QR+++VDGKVRT +P GFMDVV+IE+TNE FR++YD KGR Sbjct: 48 RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGR 107 Query: 518 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 339 + +HRI EA +KLCKVK V T K VP L T DGRTIRYPDP +KVND+I +I+T K Sbjct: 108 YVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQK 167 Query: 338 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 159 I D +KFE GNL +TGGRN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+I Sbjct: 168 ITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVI 227 Query: 158 GKGTKAYISLPRGKGIRLTIAEERDKRIAAK 66 GKG KA +SLP G GIRL+IAEERDKR+A K Sbjct: 228 GKGNKALVSLPTGAGIRLSIAEERDKRMAQK 258 >AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical protein Y39B6A.1 protein. Length = 735 Score = 39.1 bits (87), Expect = 0.003 Identities = 22/65 (33%), Positives = 26/65 (40%) Frame = -2 Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85 HHR E AH G HGTH H E H+ H G H + H P H G Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459 Query: 84 QAHRS 70 + H + Sbjct: 460 EHHHA 464 Score = 38.7 bits (86), Expect = 0.004 Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Frame = -2 Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 100 HH E H H G HGTH H GH G H A A GH HH Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580 Score = 37.9 bits (84), Expect = 0.007 Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%) Frame = -2 Query: 273 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 97 A HH E H H G HGTH H GH G H A A GH H Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521 Query: 96 RGAGQAHRSQGRRA 55 G H + A Sbjct: 522 HGTHHGHHGEHHHA 535 Score = 35.1 bits (77), Expect = 0.049 Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Frame = -2 Query: 225 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 76 H AH HG H RH E H+ H G H H HH A H Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441 Score = 35.1 bits (77), Expect = 0.049 Identities = 28/115 (24%), Positives = 36/115 (31%), Gaps = 2/115 (1%) Frame = -2 Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACG-HHRVPRETSR 235 HH + + H P H ++ ++G H H G G HH P Sbjct: 462 HHAPAHHGHHGEHHHAPAHHGHHGEHGTHH---GHHGSHHSPAHHGHHGEHHHAPAHHGH 518 Query: 234 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 70 H H HG H H H G G H H P H G+ H + Sbjct: 519 ---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 570 Score = 35.1 bits (77), Expect = 0.049 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 6/79 (7%) Frame = -2 Query: 294 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 124 HG G+ G H T L H H G HGTH H H+ HE G H A Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAH 702 Query: 123 RQGHPP---HHRRGAGQAH 76 H HH G H Sbjct: 703 HGHHDDKENHHHHGHHSKH 721 Score = 33.9 bits (74), Expect = 0.11 Identities = 27/115 (23%), Positives = 36/115 (31%), Gaps = 1/115 (0%) Frame = -2 Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELVYDHGRP*LGACGHHRVPRETSRL 232 HH + + H P H ++ ++G H E + H G G H Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGE--HHHAPAHHGHHGEHGTHHGHHGS 554 Query: 231 LRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 67 AH G HG H H G GVH + H H A H + Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608 Score = 33.5 bits (73), Expect = 0.15 Identities = 20/67 (29%), Positives = 20/67 (29%) Frame = -2 Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 85 HH P H G HG H H GH G H H P H G Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689 Query: 84 QAHRSQG 64 AH G Sbjct: 690 GAHHEHG 696 Score = 32.3 bits (70), Expect = 0.34 Identities = 30/117 (25%), Positives = 37/117 (31%), Gaps = 6/117 (5%) Frame = -2 Query: 408 HHPLPRPTYQSQRFH-PVRHRNYEDYGLHQV*VWELV-YDHGRP*LGACGHH--RVPRET 241 HH + + H P H ++ +G H V + HG GHH Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHG 614 Query: 240 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 76 + AH G HG H H H G H G H GH H A H Sbjct: 615 HHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669 Score = 32.3 bits (70), Expect = 0.34 Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%) Frame = -2 Query: 264 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 97 HH E H H G HG+ H HE H+ H G H H HH Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617 Query: 96 RGAGQAHRSQG 64 G G H G Sbjct: 618 AGYGAHHGHHG 628 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%) Frame = -2 Query: 219 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 55 AH G HG H H H+ GH G H GH H A H + A Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570 Score = 29.5 bits (63), Expect = 2.4 Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Frame = -2 Query: 264 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 88 HH P H HG H H GH G H + A G H HH A Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514 Query: 87 GQAHRSQ 67 H + Sbjct: 515 HHGHHGE 521 >AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical protein W03G1.5 protein. Length = 471 Score = 33.5 bits (73), Expect = 0.15 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = -2 Query: 225 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 64 HC G HG H R H G G R GH PPHH G++ G Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414 Score = 29.5 bits (63), Expect(2) = 0.36 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Frame = -2 Query: 225 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 100 HC G HG H + R +R GH H R PPHH Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430 Score = 28.3 bits (60), Expect = 5.6 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%) Frame = -2 Query: 210 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 61 G HG H RH R GH G +R G P G H GR Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333 Score = 21.4 bits (43), Expect(2) = 0.36 Identities = 8/19 (42%), Positives = 9/19 (47%) Frame = -2 Query: 111 PPHHRRGAGQAHRSQGRRA 55 PPH R G H G R+ Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468 >U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical protein C48B6.4 protein. Length = 623 Score = 29.9 bits (64), Expect = 1.8 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Frame = -3 Query: 524 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 393 G+ + R+T E Y+ CK+++ A K VP Y+V H R I+ YP Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351 >Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical protein R13H4.8 protein. Length = 212 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +2 Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196 C C PR C CR C +C C TRC T R C Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119 >Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical protein T01B7.8 protein. Length = 164 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +2 Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196 C C PR C CR C +C C TRC T R C Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117 >U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical protein C04G6.10 protein. Length = 166 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +2 Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196 C C PR C CR C +C C TRC T R C Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118 >U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical protein C04G6.7 protein. Length = 197 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +2 Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196 C C PR C CR C +C C TRC T R C Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119 >AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical protein Y48B6A.13b protein. Length = 377 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -2 Query: 306 LVYDHGRP*LGACGHHRVPRETSRLLRH 223 LV+D GR +G+ R RETS+LL+H Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234 >AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical protein Y48B6A.13a protein. Length = 326 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -2 Query: 306 LVYDHGRP*LGACGHHRVPRETSRLLRH 223 LV+D GR +G+ R RETS+LL+H Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183 >Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical protein T04C10.4 protein. Length = 208 Score = 28.7 bits (61), Expect = 4.2 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 408 HHPLPRPTYQSQRFHPVRHRNYEDYGLH 325 HH PTY F+P H++Y+ + L+ Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59 >Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical protein M02G9.1 protein. Length = 909 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Frame = +2 Query: 113 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 202 C C+ A C P CP + + CS T R C+P Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85 >Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical protein F40F8.5 protein. Length = 420 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = -2 Query: 240 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 64 +R RH H+G HG ++H H H R G H P+ H + Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143 Query: 63 RRAV 52 +R++ Sbjct: 144 KRSI 147 >U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical protein C27A2.5 protein. Length = 188 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +2 Query: 77 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 196 C C P+ C CR C +C C TRC T R C Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118 >AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta family protein 5 protein. Length = 938 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = +1 Query: 367 ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 531 E ++ + G V P C Y PVA + H Y A + ++R N P T Sbjct: 868 EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921 >U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical protein F53A9.9 protein. Length = 147 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = -2 Query: 168 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 73 VH+ H+G H R+ H HH G H+ Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146 >U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical protein F53A9.6 protein. Length = 86 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = -2 Query: 216 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 91 H G TH H+ + GH G H + + H H G Sbjct: 43 HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84 >AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide 3-kinase adaptersubunit protein. Length = 522 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 118 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 234 L G+EM P + L ++ K P + LMC SKE Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338 >AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide kinase adaptersubunit protein 1 protein. Length = 522 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 118 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 234 L G+EM P + L ++ K P + LMC SKE Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,964,455 Number of Sequences: 27780 Number of extensions: 365489 Number of successful extensions: 1213 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1178 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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