Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0910
         (466 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803...    31   0.60 
04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949...    28   3.2  
09_02_0183 + 5466953-5467741                                           27   7.4  
09_02_0182 + 5430380-5430694,5460162-5460950                           27   7.4  

>07_03_0685 -
           20679883-20679927,20680034-20680087,20680179-20680390,
           20680476-20680550,20683094-20683168,20686196-20686264,
           20686349-20686502,20686577-20686654,20689102-20689194,
           20689491-20689640,20690134-20690268,20691009-20691098,
           20691412-20691453,20691796-20692053,20692131-20692207,
           20693126-20693186,20693687-20693905,20694936-20695208,
           20695314-20695505,20695841-20696011
          Length = 840

 Score = 30.7 bits (66), Expect = 0.60
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   NICQWLTKSGLVKPEQLKVHGF 66
           N+  +L ++G+VK E +K+HGF
Sbjct: 819 NVSNFLVQAGIVKKEHIKIHGF 840


>04_04_1237 -
           31991817-31992569,31993452-31993550,31994343-31994976,
           31995329-31995585
          Length = 580

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   NICQWLTKSGLVKPEQLKVHGF 66
           ++  +L K+G+V+ + +KVHGF
Sbjct: 559 SVSDFLAKAGMVRKDNIKVHGF 580


>09_02_0183 + 5466953-5467741
          Length = 262

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -1

Query: 307 VRLIILQLMRRDGGDNI*DLQYFIQQRKSQGTGRGQPCSLFSVDVGAL*IHIFNRIY 137
           V  I +  +R    D + D +Y    R+ QG+GRG    L  ++  A   H+   ++
Sbjct: 78  VARITIGELRERYNDQLADTEYRYHPRQPQGSGRGSYLELAGIENDATTRHLVEMLW 134


>09_02_0182 + 5430380-5430694,5460162-5460950
          Length = 367

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -1

Query: 307 VRLIILQLMRRDGGDNI*DLQYFIQQRKSQGTGRGQPCSLFSVDVGAL*IHIFNRIY 137
           V  I +  +R    D + D +Y    R+ QG+GRG    L  ++  A   H+   ++
Sbjct: 183 VARITIGELRERYNDQLADTEYRYHPRQPQGSGRGSYLELAGIENDATTRHLVEMLW 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,604
Number of Sequences: 37544
Number of extensions: 200827
Number of successful extensions: 330
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)