BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0910 (466 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 31 0.60 04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949... 28 3.2 09_02_0183 + 5466953-5467741 27 7.4 09_02_0182 + 5430380-5430694,5460162-5460950 27 7.4 >07_03_0685 - 20679883-20679927,20680034-20680087,20680179-20680390, 20680476-20680550,20683094-20683168,20686196-20686264, 20686349-20686502,20686577-20686654,20689102-20689194, 20689491-20689640,20690134-20690268,20691009-20691098, 20691412-20691453,20691796-20692053,20692131-20692207, 20693126-20693186,20693687-20693905,20694936-20695208, 20695314-20695505,20695841-20696011 Length = 840 Score = 30.7 bits (66), Expect = 0.60 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 1 NICQWLTKSGLVKPEQLKVHGF 66 N+ +L ++G+VK E +K+HGF Sbjct: 819 NVSNFLVQAGIVKKEHIKIHGF 840 >04_04_1237 - 31991817-31992569,31993452-31993550,31994343-31994976, 31995329-31995585 Length = 580 Score = 28.3 bits (60), Expect = 3.2 Identities = 9/22 (40%), Positives = 17/22 (77%) Frame = +1 Query: 1 NICQWLTKSGLVKPEQLKVHGF 66 ++ +L K+G+V+ + +KVHGF Sbjct: 559 SVSDFLAKAGMVRKDNIKVHGF 580 >09_02_0183 + 5466953-5467741 Length = 262 Score = 27.1 bits (57), Expect = 7.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -1 Query: 307 VRLIILQLMRRDGGDNI*DLQYFIQQRKSQGTGRGQPCSLFSVDVGAL*IHIFNRIY 137 V I + +R D + D +Y R+ QG+GRG L ++ A H+ ++ Sbjct: 78 VARITIGELRERYNDQLADTEYRYHPRQPQGSGRGSYLELAGIENDATTRHLVEMLW 134 >09_02_0182 + 5430380-5430694,5460162-5460950 Length = 367 Score = 27.1 bits (57), Expect = 7.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -1 Query: 307 VRLIILQLMRRDGGDNI*DLQYFIQQRKSQGTGRGQPCSLFSVDVGAL*IHIFNRIY 137 V I + +R D + D +Y R+ QG+GRG L ++ A H+ ++ Sbjct: 183 VARITIGELRERYNDQLADTEYRYHPRQPQGSGRGSYLELAGIENDATTRHLVEMLW 239 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,660,604 Number of Sequences: 37544 Number of extensions: 200827 Number of successful extensions: 330 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 326 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 330 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 931320312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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