Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0910
         (466 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...    52   1e-08
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   2.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   2.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   2.3  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        24   3.0  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        24   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.9  
AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    23   6.9  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score = 51.6 bits (118), Expect = 1e-08
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +1

Query: 1   NICQWLTKSGLVKPEQLKVHGF 66
           NICQWLTKSGL KPEQLKVHGF
Sbjct: 89  NICQWLTKSGLAKPEQLKVHGF 110


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 311 IVNIPNSLFLFLYDIVFLN 367
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 311 IVNIPNSLFLFLYDIVFLN 367
           ++NI  SLFLFL ++ F N
Sbjct: 468 VMNINGSLFLFLTNMTFQN 486


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 311 IVNIPNSLFLFLYDIVFLN 367
           ++NI  SLFLFL ++ F N
Sbjct: 446 VMNINGSLFLFLTNMTFQN 464


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 198 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 281
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 198 GC-PRPVPCDFLCCIKYCKSYILSPPSRL 281
           GC P+P+P     CI  C SYI    S++
Sbjct: 52  GCVPKPIPS--FACIGRCASYIQVSGSKI 78


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 372  QQFKNTMSYKNKNKLLGIFTISFD 301
            ++F+   SY N+ KL+GI   + D
Sbjct: 2041 KRFRLRYSYDNRGKLIGISNAATD 2064


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 372  QQFKNTMSYKNKNKLLGIFTISFD 301
            ++F+   SY N+ KL+GI   + D
Sbjct: 2042 KRFRLRYSYDNRGKLIGISNAATD 2065


>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 151 KYVFREHRRLQRKENTVVRALCLATSSVV*NIVN 252
           K +F   +    K   ++R++CL  + V   +VN
Sbjct: 15  KKIFPLRKEQMMKSGEMIRSVCLGKTKVAEELVN 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,241
Number of Sequences: 2352
Number of extensions: 7930
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)