Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0910
         (466 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.70 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   4.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 95   PHSTLYYERLRVVIINPIKNMYLESTDVYREKRTRLSAPCA 217
            PHSTL Y+     ++ P K    +S D  +E  T  +A  A
Sbjct: 1072 PHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSTVTAAAAA 1112


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -2

Query: 270 AAIIYKIYNILYNRGSRKAQGADNRVLFSL*TSVLSKYI 154
           +++I +  N+  +RGS    G +N   + + T+  SKY+
Sbjct: 173 SSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYM 211


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 317 NIPNSLFLFLYDIVFLNCCNNSINK*HVFV 406
           N+ N  F  +  ++ L C +  +NK  VF+
Sbjct: 51  NVINPFFCDMSPLLSLVCADTRLNKLAVFI 80


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 195 HGCPRPVPCDFLCC 236
           H C   + CD LCC
Sbjct: 107 HLCKLWLTCDVLCC 120


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 195 HGCPRPVPCDFLCC 236
           H C   + CD LCC
Sbjct: 107 HLCKLWLTCDVLCC 120


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 125 RVVIINPIKNMYLESTDVYR 184
           R ++  PI N Y E+  +Y+
Sbjct: 773 RGILFMPIPNRYREAKQIYK 792


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 195 HGCPRPVPCDFLCC 236
           H C   + CD LCC
Sbjct: 107 HLCKLWLTCDVLCC 120


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 447 IGYRAPPRVFFFFFTK 400
           +GY  P R F  FFT+
Sbjct: 236 LGYVMPDRTFAPFFTR 251


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 143  PIKNMYLESTDV 178
            P KN Y E+TD+
Sbjct: 1268 PAKNTYFEATDL 1279


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 143  PIKNMYLESTDV 178
            P KN Y E+TD+
Sbjct: 1264 PAKNTYFEATDL 1275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,407
Number of Sequences: 438
Number of extensions: 2488
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)