Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0909
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q559G0 Cluster: Putative uncharacterized protein; n=4; ...    41   0.027
UniRef50_A7AYH1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_A0J0I3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q559G0 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1212

 Score = 41.1 bits (92), Expect = 0.027
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -2

Query: 326 ENYIIISIGFGNHSKLNTPLAKFPINGKGDSKE-P*LQNVFIFIFKDSVAKILLLIGNSH 150
           E ++IIS+ +GN+      L KF +N  GDSK  P +   F  +         +L  N H
Sbjct: 504 EYFLIISLEYGNYE-----LFKFIVNHYGDSKVLPPIFKNFKSVSNHGEEYPYILFSNCH 558

Query: 149 HNKQEYFFISTNVTDAHRNNNKS 81
             KQ   FI+  + D + NNN +
Sbjct: 559 SKKQRIQFINNAINDHNNNNNNN 581


>UniRef50_A7AYH1 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 314

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = -2

Query: 254 INGKGDSKEP*LQNVFIFIFKDSVAKILLLIGNSHHNKQEYFFISTNVTDAHRNN 90
           I  K D KE  ++ V + +F  +VA +L L+    + +Q+YF ++ +V  +HR N
Sbjct: 11  IRRKNDKKENAMKAVILVVFVLTVAAVLCLL--EAYREQQYFKVTEDVVVSHRLN 63


>UniRef50_A0J0I3 Cluster: Putative uncharacterized protein; n=1;
           Shewanella woodyi ATCC 51908|Rep: Putative
           uncharacterized protein - Shewanella woodyi ATCC 51908
          Length = 114

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 65  CQSRYSFYCYYDGRLSRLY 121
           C S Y+ YC YDG++SR+Y
Sbjct: 14  CYSSYNGYCQYDGKVSRIY 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,537,317
Number of Sequences: 1657284
Number of extensions: 11609614
Number of successful extensions: 21171
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21161
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)