Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0909
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.4  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 557 MTSYCCCIPLSSQIYSCL 504
           M SY C + LS+ IYS L
Sbjct: 1   MKSYACLLVLSALIYSVL 18


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 557 MTSYCCCIPLSSQIYSCL 504
           M SY C + LS+ IYS L
Sbjct: 1   MKSYACLLVLSALIYSVL 18


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 62  YCQSRYSFYCYYDGR 106
           YC++     CYYD +
Sbjct: 19  YCKAESKVVCYYDSK 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,346
Number of Sequences: 336
Number of extensions: 2983
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)