Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0905
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   7.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   7.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   7.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    20   7.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    20   7.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 249 FLCLIIVFLLNYTTSEFVCAIRNLFIL 169
           F+ +++   + + T EFV  IRN F++
Sbjct: 165 FIFIVVKSGVAFQTIEFVSIIRNRFVI 191


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 PPRV*LVTLGVTHGNDPMSTKLL 297
           PP     +L  ++ N P ST L+
Sbjct: 318 PPEPISASLSTSNSNSPSSTNLI 340


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -1

Query: 237 IIVFLLNYTTSEFVCAIRNLFILQVGYPIDLKLQLLL 127
           +I+   +++ ++FV  +  L +L VG+ +   L LL+
Sbjct: 627 VILETFHFSEADFVMDVVMLAVLIVGFRLVAFLALLV 663


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -1

Query: 237 IIVFLLNYTTSEFVCAIRNLFILQVGYPIDLKLQLLL 127
           +I+   +++ ++FV  +  L +L VG+ +   L LL+
Sbjct: 627 VILETFHFSEADFVMDVVMLAVLIVGFRLVAFLALLV 663


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 PPRV*LVTLGVTHGNDPMSTKLL 297
           PP     +L  ++ N P ST L+
Sbjct: 107 PPEPISASLSTSNSNSPSSTNLI 129


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 PPRV*LVTLGVTHGNDPMSTKLL 297
           PP     +L  ++ N P ST L+
Sbjct: 107 PPEPISASLSTSNSNSPSSTNLI 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,441
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)