Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0901
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48735 Cluster: Isocitrate dehydrogenase [NADP], mitoch... 304 7e-82
UniRef50_Q0CXI1 Cluster: Isocitrate dehydrogenase, mitochondrial... 298 6e-80
UniRef50_Q8LPJ5 Cluster: Isocitrate dehydrogenase-like protein; ... 285 5e-76
UniRef50_Q9SRZ6 Cluster: F12P19.10 protein; n=26; cellular organ... 278 6e-74
UniRef50_A2WMU2 Cluster: Putative uncharacterized protein; n=5; ... 233 3e-60
UniRef50_A5ZVX5 Cluster: Putative uncharacterized protein; n=1; ... 209 4e-53
UniRef50_A5N5L9 Cluster: Idh; n=2; Bacteria|Rep: Idh - Clostridi... 206 3e-52
UniRef50_A2XVE4 Cluster: Putative uncharacterized protein; n=2; ... 144 4e-46
UniRef50_UPI0000F1EC8D Cluster: PREDICTED: similar to Isocitrate... 134 1e-30
UniRef50_Q4VCC2 Cluster: Isocitrate dehydrogenase; n=4; Eukaryot... 116 4e-25
UniRef50_Q2K7T8 Cluster: NADP-dependent isocitrate dehydrogenase... 97 2e-19
UniRef50_A3K670 Cluster: NADP-dependent isocitrate dehydrogenase... 88 2e-16
UniRef50_A3JDN6 Cluster: Isocitrate dehydrogenase; n=5; Gammapro... 75 1e-12
UniRef50_Q5DBI8 Cluster: SJCHGC09598 protein; n=1; Schistosoma j... 71 2e-11
UniRef50_Q00WM7 Cluster: COG0538: Isocitrate dehydrogenases; n=3... 69 1e-10
UniRef50_A4VDP7 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_A0C1D3 Cluster: Chromosome undetermined scaffold_141, w... 35 1.1
UniRef50_Q757T0 Cluster: Probable E3 ubiquitin-protein ligase HU... 35 1.5
UniRef50_Q91L92 Cluster: ORF160; n=1; Shrimp white spot syndrome... 34 2.6
UniRef50_A0KSD7 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_Q61R47 Cluster: Putative uncharacterized protein CBG067... 33 4.6
UniRef50_Q0SI24 Cluster: 3-isopropylmalate dehydrogenase; n=9; B... 33 6.0
UniRef50_UPI000038E009 Cluster: hypothetical protein Faci_030014... 32 8.0
UniRef50_Q7R4L7 Cluster: GLP_49_21919_24513; n=1; Giardia lambli... 32 8.0
UniRef50_P91985 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q92TY6 Cluster: NH(3)-dependent NAD(+) synthetase; n=11... 32 8.0
>UniRef50_P48735 Cluster: Isocitrate dehydrogenase [NADP],
mitochondrial precursor (EC 1.1.1.42) (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH); n=493;
cellular organisms|Rep: Isocitrate dehydrogenase [NADP],
mitochondrial precursor (EC 1.1.1.42) (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) - Homo
sapiens (Human)
Length = 452
Score = 304 bits (747), Expect = 7e-82
Identities = 136/183 (74%), Positives = 154/183 (84%), Gaps = 1/183 (0%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITPDE RVEEFKLKKMW SPNGTIRNILGGTVFREPI+C++IPR+VPGWTKPI IG
Sbjct: 112 KCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIG 171
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGT-TERRVLYDFKTPGVAMGMYNTDESIRSF 358
RHAHGDQYKA DFV + G ++V+T +DG+ + +Y+F GV MGMYNTDESI F
Sbjct: 172 RHAHGDQYKATDFVADRAGTFKMVFTPKDGSGVKEWEVYNFPAGGVGMGMYNTDESISGF 231
Query: 359 AHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLID 538
AHS FQ A+QKKWPLY+STKNTILK YDGRFKDIF+E+F YKT FD+ KIWYEHRLID
Sbjct: 232 AHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFDKHYKTDFDKNKIWYEHRLID 291
Query: 539 DMV 547
DMV
Sbjct: 292 DMV 294
>UniRef50_Q0CXI1 Cluster: Isocitrate dehydrogenase, mitochondrial;
n=2; Eurotiomycetidae|Rep: Isocitrate dehydrogenase,
mitochondrial - Aspergillus terreus (strain NIH 2624)
Length = 466
Score = 298 bits (731), Expect = 6e-80
Identities = 136/183 (74%), Positives = 158/183 (86%), Gaps = 1/183 (0%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITPDE RVEEFKLKKMWLSPNGTIRNILGGTVFREPI+ +IPR+VPGWTKPI+IG
Sbjct: 128 KCATITPDEARVEEFKLKKMWLSPNGTIRNILGGTVFREPIVIPAIPRLVPGWTKPIIIG 187
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKT-PGVAMGMYNTDESIRSF 358
RHA GDQY+A D V+P PGK+ELVYT +G E +YDF++ GVAM MYNTD+SIR F
Sbjct: 188 RHAFGDQYRATDRVIPGPGKLELVYTPANGQPESVQVYDFQSGGGVAMSMYNTDDSIRGF 247
Query: 359 AHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLID 538
AHSSF++AL K PLY+STKNTILKRYDGRFKDIF+E+++++YK +FD IWYEHRLID
Sbjct: 248 AHSSFKMALLKGLPLYMSTKNTILKRYDGRFKDIFQEIYEAEYKKEFDAKGIWYEHRLID 307
Query: 539 DMV 547
DMV
Sbjct: 308 DMV 310
>UniRef50_Q8LPJ5 Cluster: Isocitrate dehydrogenase-like protein;
n=6; core eudicotyledons|Rep: Isocitrate
dehydrogenase-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 485
Score = 285 bits (699), Expect = 5e-76
Identities = 128/183 (69%), Positives = 151/183 (82%), Gaps = 1/183 (0%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITPDE RV+EF LK MW SPNGTIRNIL GTVFREPI+C +IPR+VPGW KPI IG
Sbjct: 144 KCATITPDEGRVKEFGLKSMWRSPNGTIRNILDGTVFREPIMCSNIPRLVPGWEKPICIG 203
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRV-LYDFKTPGVAMGMYNTDESIRSF 358
RHA GDQY+A D V+ PGK+++V+ DG + +YDFK PGVA+ MYN DESIR+F
Sbjct: 204 RHAFGDQYRATDTVIKGPGKLKMVFVPEDGNAPVELDVYDFKGPGVALAMYNVDESIRAF 263
Query: 359 AHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLID 538
A SS +AL KKWPLYLSTKNTILK+YDGRFKDIF+EV+++++K KF+E IWYEHRLID
Sbjct: 264 AESSMAMALTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKQKFEEHSIWYEHRLID 323
Query: 539 DMV 547
DMV
Sbjct: 324 DMV 326
>UniRef50_Q9SRZ6 Cluster: F12P19.10 protein; n=26; cellular
organisms|Rep: F12P19.10 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 410
Score = 278 bits (682), Expect = 6e-74
Identities = 124/182 (68%), Positives = 148/182 (81%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITPDE RV EF LK+MW SPNGTIRNIL GTVFREPI+C+++P++VPGWTKPI IG
Sbjct: 74 KCATITPDEGRVTEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVPKLVPGWTKPICIG 133
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFA 361
RHA GDQY+A D V+ PGK+ + + +DG TE V GVAM MYNTDESIR+FA
Sbjct: 134 RHAFGDQYRATDAVIKGPGKLTMTFEGKDGKTETEVFTFTGEGGVAMAMYNTDESIRAFA 193
Query: 362 HSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLIDD 541
+S A +KKWPLYLSTKNTILK+YDGRFKDIF+EV+++ +K+K+D A IWYEHRLIDD
Sbjct: 194 DASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKYDAAGIWYEHRLIDD 253
Query: 542 MV 547
MV
Sbjct: 254 MV 255
>UniRef50_A2WMU2 Cluster: Putative uncharacterized protein; n=5;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 475
Score = 233 bits (569), Expect = 3e-60
Identities = 114/193 (59%), Positives = 138/193 (71%), Gaps = 18/193 (9%)
Frame = +2
Query: 23 DEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIGRHAHGDQ 202
DE RV+EF L MW SPNGTIRNIL GTVFREPI+C++IPR+VPGW KPI IGRHA GDQ
Sbjct: 124 DEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWIKPICIGRHAFGDQ 183
Query: 203 YKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFAHSSFQVA 382
Y+A D V+ PGK++LV+ R+ E V GVA+ MYNTDESI +FA +S +A
Sbjct: 184 YRATDTVIKGPGKLKLVFDGREEQIELDVFNFTGAGGVALSMYNTDESIWAFAEASMNMA 243
Query: 383 LQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIW--------------- 517
QK+WPLYLSTKNTILK+YDGRFKDIF+E +++ ++ KFD+A IW
Sbjct: 244 YQKRWPLYLSTKNTILKKYDGRFKDIFQENYETKWRAKFDDAGIWNMEPYFPPLCPNHFC 303
Query: 518 ---YEHRLIDDMV 547
YEHRLIDDMV
Sbjct: 304 CGRYEHRLIDDMV 316
>UniRef50_A5ZVX5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 417
Score = 209 bits (510), Expect = 4e-53
Identities = 96/182 (52%), Positives = 128/182 (70%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITP+ R++E+ LKKM+ SPNGTIR IL GTVFR PI+ + I V W KPI +
Sbjct: 87 KCATITPNHARMDEYDLKKMYKSPNGTIRAILDGTVFRAPIVVKGIEPCVRNWKKPITLA 146
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFA 361
RHA+GD YK + + KPGKVELVYT+ DG +R ++ +FK PGVAMGM+N SI SFA
Sbjct: 147 RHAYGDIYKNTEMYIDKPGKVELVYTSEDGEEKRSLVQEFKAPGVAMGMHNMTASIESFA 206
Query: 362 HSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLIDD 541
S F AL K ++ K+TI K YD +FK++F+ VF +++K +F+EA + Y + LIDD
Sbjct: 207 RSCFNYALDTKQDVWFGAKDTISKTYDAKFKEVFQTVFDTEFKDRFEEAGLTYFYSLIDD 266
Query: 542 MV 547
+V
Sbjct: 267 IV 268
>UniRef50_A5N5L9 Cluster: Idh; n=2; Bacteria|Rep: Idh - Clostridium
kluyveri DSM 555
Length = 401
Score = 206 bits (503), Expect = 3e-52
Identities = 96/182 (52%), Positives = 128/182 (70%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITP+ +RV+E+ LK MW SPNGTIR IL GTVFR PI+ SI ++ W KPI +
Sbjct: 73 KCATITPNAKRVKEYNLKSMWKSPNGTIRAILDGTVFRTPIIVNSIRPLMRTWEKPITVA 132
Query: 182 RHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFA 361
RHA+GD Y+ ++ V +PGK+ELV+T+ G R+ L+ F PGV MGM+N D+SI SFA
Sbjct: 133 RHAYGDVYRDVEYKVEEPGKMELVFTSEKGEETRQTLHVFNGPGVVMGMHNLDKSIESFA 192
Query: 362 HSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLIDD 541
S F AL L+ ++K+TI K YD RFKDIF+E++ ++Y KF++A I Y + LIDD
Sbjct: 193 RSCFNYALDMNQNLWFASKDTISKTYDHRFKDIFQEIYDTEYDAKFNDAGIEYFYTLIDD 252
Query: 542 MV 547
V
Sbjct: 253 AV 254
>UniRef50_A2XVE4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 371
Score = 144 bits (350), Expect(2) = 4e-46
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +2
Query: 290 LYDFKTPGVAMGMYNTDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEE 469
+Y+FK PGVA+ MYN DESIR+FA SS +AL KKWPLYLSTKNTILK+YDGRFKDIF+E
Sbjct: 44 VYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQE 103
Query: 470 VFQSDYKTKFDEAKIWYEHRLIDDMV 547
V++ +K KF+E IWYEHRLIDDMV
Sbjct: 104 VYEEKWKEKFEENSIWYEHRLIDDMV 129
Score = 91.5 bits (217), Expect = 1e-17
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +2
Query: 341 ESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKI 514
+SIR+FA SS +AL KKWPLYLSTKNTILK+YDGRFKDIF+EV++ +K KF+E I
Sbjct: 157 QSIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENSI 214
Score = 62.9 bits (146), Expect(2) = 4e-46
Identities = 27/40 (67%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Frame = +2
Query: 59 MWLSPNGTIRNILGGTVFREPILCQSIPRV--VPGWTKPI 172
MW SPNGTIRNIL GTVFREPILC+++PR+ VP +P+
Sbjct: 1 MWRSPNGTIRNILNGTVFREPILCKNVPRILSVPDGAEPV 40
>UniRef50_UPI0000F1EC8D Cluster: PREDICTED: similar to Isocitrate
dehydrogenase 1 (NADP+), soluble; n=2; Danio rerio|Rep:
PREDICTED: similar to Isocitrate dehydrogenase 1
(NADP+), soluble - Danio rerio
Length = 206
Score = 134 bits (324), Expect = 1e-30
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = +2
Query: 2 KCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKPIVIG 181
KCATITPDE+RVEEFKLK+MW SPNGTIRNILGGTVFRE I+C++IPR+VPGW KPI+IG
Sbjct: 79 KCATITPDEKRVEEFKLKQMWRSPNGTIRNILGGTVFREAIICKNIPRLVPGWIKPIIIG 138
Query: 182 RHAHGDQ 202
RHAHGDQ
Sbjct: 139 RHAHGDQ 145
>UniRef50_Q4VCC2 Cluster: Isocitrate dehydrogenase; n=4;
Eukaryota|Rep: Isocitrate dehydrogenase - Saltugilia
latimeri
Length = 158
Score = 116 bits (279), Expect = 4e-25
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2
Query: 335 TDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKI 514
TDESI SFA +S A +KKWPLYLSTKNTILK+YDGRFKDIF+EV++ +K+K++ A I
Sbjct: 1 TDESIYSFAEASMTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEKSWKSKYEAAGI 60
Query: 515 WYEHRLIDDM 544
WYEHRLIDDM
Sbjct: 61 WYEHRLIDDM 70
>UniRef50_Q2K7T8 Cluster: NADP-dependent isocitrate dehydrogenase
protein; n=1; Rhizobium etli CFN 42|Rep: NADP-dependent
isocitrate dehydrogenase protein - Rhizobium etli
(strain CFN 42 / ATCC 51251)
Length = 437
Score = 97.5 bits (232), Expect = 2e-19
Identities = 64/180 (35%), Positives = 96/180 (53%)
Frame = -1
Query: 544 HVVN*TMLVPYLGFIKLSLVVTLKNFFENVFETTIVTFQNGILRRQV*RPFFL*SYLKTG 365
HVV+ T+ V GF++L L L +F E+V E ++ ++G+L RQV RPF + G
Sbjct: 171 HVVDQTVFVGDPGFLELILEFGLVDFLEDVLEAAVIGLEDGVLGRQVDRPFAHQAVHHRG 230
Query: 364 MGKGPNRFVGIVHAHSNARSFKII*YTPLCRTISCSVNKFNLSGFRYNKILRLVLVAVRM 185
G+ +RFV +VH H NA + ++ + L+ ++ VLVA +
Sbjct: 231 AGEFADRFVEVVHGHGNAGARRVEDLLLDDGAVFTDELDRQLALAGELEVGCAVLVAESV 290
Query: 184 TAYHNRFRPTRHNPRDTLTQYRFAEYCTAQNVTDRSVRA*PHFLQLELFYSLFIRCDSSA 5
TA +R RP + R+ R AE A+NV+DR+VRA PHFL++E + FIR D A
Sbjct: 291 TADDDRLRPAGNEARNVAADDRLAEDDAAENVSDRAVRALPHFLEIEFLDAGFIRRDRCA 350
>UniRef50_A3K670 Cluster: NADP-dependent isocitrate dehydrogenase
protein; n=2; Rhodobacteraceae|Rep: NADP-dependent
isocitrate dehydrogenase protein - Sagittula stellata
E-37
Length = 459
Score = 87.8 bits (208), Expect = 2e-16
Identities = 61/182 (33%), Positives = 90/182 (49%)
Frame = -1
Query: 547 HHVVN*TMLVPYLGFIKLSLVVTLKNFFENVFETTIVTFQNGILRRQV*RPFFL*SYLKT 368
HHVV+ +LVP ++L + L + E V E +V +NG+L RQV RP + ++
Sbjct: 201 HHVVDQPVLVPDALRLELLGKLRLVDLLEQVLEPPVVGLENGVLGRQVHRPAQRQTVVQR 260
Query: 367 GMGKGPNRFVGIVHAHSNARSFKII*YTPLCRTISCSVNKFNLSGFRYNKILRLVLVAVR 188
G GK +R V +VHAH + +++ + L+ +I LVLVA
Sbjct: 261 GAGKVADRLVLVVHAHVDPGIGRVVDLALDHLAVGAFPFHRQLARRGEVEIRGLVLVAEG 320
Query: 187 MTAYHNRFRPTRHNPRDTLTQYRFAEYCTAQNVTDRSVRA*PHFLQLELFYSLFIRCDSS 8
+ A+H+ P RH R R AE AQ+V DR+V PH L+ E +L +R D
Sbjct: 321 VPAHHDGRGPARHEARHVAADDRLAEDDAAQDVADRAVGRLPHLLETEFLDTLLVRGDRR 380
Query: 7 AF 2
AF
Sbjct: 381 AF 382
>UniRef50_A3JDN6 Cluster: Isocitrate dehydrogenase; n=5;
Gammaproteobacteria|Rep: Isocitrate dehydrogenase -
Marinobacter sp. ELB17
Length = 582
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Frame = +2
Query: 68 SPNGTIRNILGGTVFREPILCQSIPRVVPGWT-KPIVIGRHAHGDQYKAQDFVVPKPGKV 244
SPNG IR +GG + RE I Q++ P W + I + +G + + + G V
Sbjct: 106 SPNGAIRKGIGGNITREDIQFQNLRVRKPDWIDRDIDVDTMDNGGIKDSYNELSSSTGVV 165
Query: 245 ELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFAHSSFQVALQKKWPLYLSTKNT 424
+L++ + G D K + N ++++AH FQ A+ +K YL K+T
Sbjct: 166 KLLFVGKSGNPVELHRRDVKKGDPWLLATNDIADVKAWAHRFFQRAIDEKRDAYLGLKDT 225
Query: 425 ILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLID 538
++ YDG + E +++ +YK +F+ I Y + L+D
Sbjct: 226 VIAGYDGVMRAAIEAIYKQEYKKQFEAVGINYYYELVD 263
>UniRef50_Q5DBI8 Cluster: SJCHGC09598 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09598 protein - Schistosoma
japonicum (Blood fluke)
Length = 129
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2
Query: 123 IGSRNTVPPKMLRIVPFGLSHIFFNLNSSTLCSSGVIVAHL 1
+GSR TVPP++LRIVPFG SHIFF LNS T CSSGV+VAHL
Sbjct: 1 MGSRKTVPPRILRIVPFGDSHIFFKLNSLTRCSSGVMVAHL 41
>UniRef50_Q00WM7 Cluster: COG0538: Isocitrate dehydrogenases; n=3;
Ostreococcus|Rep: COG0538: Isocitrate dehydrogenases -
Ostreococcus tauri
Length = 429
Score = 68.5 bits (160), Expect = 1e-10
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Frame = +2
Query: 11 TITPDEQRVEEFKLKKMWLSPNGTIRNILGG-TVFREPILCQSIPRVVPGWTKPIVIGRH 187
T+TP +V+ L+K W SPNG +R G T+ R+ I I V G+ KP++ RH
Sbjct: 97 TVTPTADQVKRLGLRKSWGSPNGAMRRGWNGITISRDTI---HIDGVELGYKKPVLFERH 153
Query: 188 AHGDQYKAQDFVVPKPGKVELVYTTRDG-TTERRVLYDFK----TPGVAMGMYNTDESIR 352
A G +Y A V K GK+ +T +G + V+ D + + +N +++
Sbjct: 154 AVGGEYSAGYKNVGK-GKLTTTFTPSEGPDAGKTVVVDEREIVDEEAAVVTYHNPYDNVH 212
Query: 353 SFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDEAKIWYE 523
A F L+ K Y+ TK T+ K + F I VF ++K +F A + E
Sbjct: 213 DLARFFFGRCLEAKVTPYVVTKKTVFK-WQEPFWQIMRTVFDEEFKAQFVAAGVMKE 268
>UniRef50_A4VDP7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 141
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -2
Query: 93 MLRIVPFGLSHIFFNLNSSTLCSSGVIVAHL 1
MLRIVP G HIF +LNS T SS VIVAHL
Sbjct: 1 MLRIVPLGEGHIFLSLNSLTRASSAVIVAHL 31
>UniRef50_A0C1D3 Cluster: Chromosome undetermined scaffold_141,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 490
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 317 AMGMYNTDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTK 496
++ + ++ I + H SF++ L K +STKN ++ Y+G + FE Q D+K
Sbjct: 101 SLSIITSNNIINQWRHYSFKLPLPKLNNQDVSTKNQKIRAYNGSYSINFESTQQRDFKYV 160
Query: 497 F 499
F
Sbjct: 161 F 161
>UniRef50_Q757T0 Cluster: Probable E3 ubiquitin-protein ligase HUL4;
n=1; Eremothecium gossypii|Rep: Probable E3
ubiquitin-protein ligase HUL4 - Ashbya gossypii (Yeast)
(Eremothecium gossypii)
Length = 839
Score = 34.7 bits (76), Expect = 1.5
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 401 LYLSTKNTILK--RYDGR-FKDIFEEVFQSDYKTKFDEAKIWY 520
LY T +LK YDG F+DIF F++ + +FDE+KI Y
Sbjct: 614 LYPETGTNMLKMLEYDGEDFEDIFALTFETCFPDRFDESKIHY 656
>UniRef50_Q91L92 Cluster: ORF160; n=1; Shrimp white spot syndrome
virus|Rep: ORF160 - White spot syndrome virus (WSSV)
Length = 786
Score = 33.9 bits (74), Expect = 2.6
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 341 ESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDE 505
+SIR F S Q +QK+W ++ N ++ YDG EE+F+ YK +E
Sbjct: 702 QSIRKFIGESMQ-HVQKEWSSAVNNGNRGVENYDGLNAQFSEELFELLYKLIIEE 755
>UniRef50_A0KSD7 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Shewanella sp. (strain ANA-3)
Length = 112
Score = 33.9 bits (74), Expect = 2.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 14 ITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRVVPGWTKP 169
+T ++ VEE +++MW+ G I NI G + +P + I + W +P
Sbjct: 53 VTENDAGVEEVNVERMWVIVKGRIDNIYRGQLDNDPYCTEEIRSGMEVWFQP 104
>UniRef50_Q61R47 Cluster: Putative uncharacterized protein CBG06736;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG06736 - Caenorhabditis
briggsae
Length = 394
Score = 33.1 bits (72), Expect = 4.6
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +2
Query: 224 VPKPG--KVELVYTTRDGTTERRVLYDFKTPGVAMGMYNTDESIRSFAHSSFQVALQKKW 397
+PK G V + + ++ ++ + DF+ M+ TD +++ F+H A +
Sbjct: 43 IPKKGGITVSVEFWIQEISSISEMTNDFEMEIYINEMW-TDPNLK-FSHLG---ACKANL 97
Query: 398 PLYLSTKNTILKR----YDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRL 532
LY T N + K + +F +I+E FQ+ + T FD +W +RL
Sbjct: 98 TLYEQTLNKLWKPNTCFVNSKFAEIYESPFQNVFLTLFDNGTVWVNYRL 146
>UniRef50_Q0SI24 Cluster: 3-isopropylmalate dehydrogenase; n=9;
Bacteria|Rep: 3-isopropylmalate dehydrogenase -
Rhodococcus sp. (strain RHA1)
Length = 365
Score = 32.7 bits (71), Expect = 6.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 TPGVAMGM-YNTDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQS 481
TP VA+ + T ++ AH++F +A + + + K +L G F+D+ EV Q
Sbjct: 156 TPDVALAVGVVTRKACERIAHTAFALARTRGRHVTIVHKANVLSMTTGLFRDVCREVGQR 215
Query: 482 DY 487
DY
Sbjct: 216 DY 217
>UniRef50_UPI000038E009 Cluster: hypothetical protein Faci_03001440;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001440 - Ferroplasma acidarmanus fer1
Length = 138
Score = 32.3 bits (70), Expect = 8.0
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 158 WTKPIVIGRHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYD 298
+ K + IG+ ++YKA DFVV V L + GT E++V+Y+
Sbjct: 28 YKKQVFIGKQLFNNRYKA-DFVVDNSIIVSLKWQQVAGTAEQKVIYE 73
>UniRef50_Q7R4L7 Cluster: GLP_49_21919_24513; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_21919_24513 - Giardia lamblia
ATCC 50803
Length = 864
Score = 32.3 bits (70), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 208 LVLVAVRMTAYHNRFRPTRHNPRDTLTQYRFAEYCTAQNVTDRSV 74
LV V R+ + H+R RP+ NP LT+ F E C ++ T SV
Sbjct: 275 LVAVLPRILSLHSRERPSNENPPRRLTREEF-EDCMGESATYSSV 318
>UniRef50_P91985 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 400
Score = 32.3 bits (70), Expect = 8.0
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 335 TDESIRSFAH---SSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDE 505
TD S+R F H + L ++ L T NT + +F +I+E FQ+ + T FD
Sbjct: 127 TDPSLR-FPHLGACKANLTLDQQTLTKLWTPNTCF--VNSKFAEIYESSFQNVFLTLFDN 183
Query: 506 AKIWYEHRL 532
+W +R+
Sbjct: 184 GTVWVNYRV 192
>UniRef50_Q92TY6 Cluster: NH(3)-dependent NAD(+) synthetase; n=11;
Proteobacteria|Rep: NH(3)-dependent NAD(+) synthetase -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 334
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 113 REPILCQSIPRVVPGWTKPIVIGRHAHGDQYKAQDFVVPKP 235
R+ + + +P PGW IVI GD Y VV P
Sbjct: 117 RDAFIRELVPDYGPGWASKIVIANALEGDGYNISSLVVQDP 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,074,727
Number of Sequences: 1657284
Number of extensions: 12950927
Number of successful extensions: 33517
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 32569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33501
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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