BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0899 (720 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical pr... 103 1e-22 AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 69 3e-12 Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.9 AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.5 Z81493-1|CAB04039.1| 178|Caenorhabditis elegans Hypothetical pr... 28 7.7 AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 28 7.7 >Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical protein D2013.7 protein. Length = 294 Score = 103 bits (248), Expect = 1e-22 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 20/188 (10%) Frame = +2 Query: 2 ALNISVKVHPVVLFQIVDAYERR------NADSHRVIGTLLGTSDKGVVEVTNCFCVPHK 163 A N++V VHP V +VD + RR N + +GTL+G +KG ++VTNCF +P Sbjct: 2 ASNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFN 61 Query: 164 EHADQVEAELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECRE---- 331 E D +E + + + ++ + +E VGW+ T +++T+ + H+YY R E Sbjct: 62 ESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASAR 121 Query: 332 ----PVHV-TLDTSLAGG---RMGLRAYVCVPLGVPN--GKQGCMFTPVDVTLTCYEPEI 481 P+ V T+DT+ +G RM +RAY+ G+P G +F P+ V L + E+ Sbjct: 122 RESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGEL 181 Query: 482 VGLQVCQK 505 V +Q+ +K Sbjct: 182 VAMQLIEK 189 >AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome regulatory particle,non-atpase-like protein 8 protein. Length = 362 Score = 68.9 bits (161), Expect = 3e-12 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 6/132 (4%) Frame = +2 Query: 17 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKG-VVEVTNCFCVPHKEHADQVEA 187 V VHP+VL +VD + R + RV+G LLG+ K +++ N F VP E Sbjct: 41 VTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKST 100 Query: 188 ---ELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS 358 +++Y +Y + +V + E IVGW+ TG ++ + I+E R C PV V +D Sbjct: 101 WFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVIIDAE 160 Query: 359 LAGGRMGLRAYV 394 + AY+ Sbjct: 161 PKNIGLPTEAYI 172 >Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical protein F36H1.9 protein. Length = 160 Score = 29.9 bits (64), Expect = 1.9 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 141 TASACHTKNMPIKSKRNLITRWMFTS 218 T ACHT M + K+N IT W +++ Sbjct: 55 TLVACHTLQMFLAEKKNTITHWKYST 80 >AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical protein Y67H2A.6 protein. Length = 426 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 6/93 (6%) Frame = +2 Query: 17 VKVHPVVLFQIVDAYERRNADS----HRVIGTLLGTSDKGVVEVTNCFC--VPHKEHADQ 178 V +HP+V+ Q+ + Y R +V G +LG + VE N F + +E A+ Sbjct: 14 VLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKMETEEMAEP 73 Query: 179 VEAELNYAMDVYELNRRVNSSESIVGWWATGNE 277 V + + + V ++G + G + Sbjct: 74 VTFSTEHLLQRADQYLEVFPELQVIGLYCAGED 106 >Z81493-1|CAB04039.1| 178|Caenorhabditis elegans Hypothetical protein F01D5.1 protein. Length = 178 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -2 Query: 128 PLLCRSCPIRCR*LCENLHFDVRMRPQFEIKQQD 27 PLL SCP+ C+ LC + P F+ K D Sbjct: 44 PLLKESCPVTCK-LCPPTEAPTTLAPCFDDKDTD 76 >AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubularin) family protein 5 protein. Length = 1744 Score = 27.9 bits (59), Expect = 7.7 Identities = 9/24 (37%), Positives = 11/24 (45%) Frame = +1 Query: 391 CLCTIRSAKWKARLHVHSCRCHSH 462 C CT +W +H CR H H Sbjct: 1556 CYCTNILTRWSKAVHCKKCRIHVH 1579 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,744,930 Number of Sequences: 27780 Number of extensions: 306231 Number of successful extensions: 782 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 731 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 780 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1687292480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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