Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0898
         (509 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.033
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    36   0.40 
UniRef50_Q5A6K9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.9 bits (89), Expect = 0.033
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -1

Query: 218 Q*ARFRSSGRFCEAILLLGLVL 153
           Q +RFRS GRFCEA+LLLGLVL
Sbjct: 83  QSSRFRSDGRFCEALLLLGLVL 104


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 36.3 bits (80), Expect = 0.40
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 465 PRGGARYPIRPIVSR 509
           PRGGARYPIRPIVSR
Sbjct: 259 PRGGARYPIRPIVSR 273


>UniRef50_Q5A6K9 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 131

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = -3

Query: 435 IRIIKLFRFYSVCISASY*YF--LVAHLSLVDQFLIFLR*SF--LKG-SFVPFRPPF*TV 271
           IRI+ +   Y + +S  Y +F  L+A  SL   FL FL   F  LK  S +P+ PPF   
Sbjct: 20  IRILIIHTLYKILVSLDYYFFFFLLAFDSLGSAFL-FLSSVFTTLKNPSSLPWTPPFNPF 78

Query: 270 YGTDSPLSFSPDLS 229
           +   +PLS    L+
Sbjct: 79  FSFSAPLSILSSLN 92


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,055,042
Number of Sequences: 1657284
Number of extensions: 7117776
Number of successful extensions: 14544
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14543
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)