Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0898
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051894-1|AAK93318.1|  931|Drosophila melanogaster LD38259p pro...    29   4.8  
AF264756-1|AAK20948.1|  836|Drosophila melanogaster Mlx interact...    29   4.8  
AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interact...    29   4.8  
AF264754-1|AAK20946.1| 1119|Drosophila melanogaster Mlx interact...    29   4.8  
AE014134-3382|AAN11113.1|  836|Drosophila melanogaster CG18362-P...    29   4.8  
AE014134-3381|AAN11112.1|  925|Drosophila melanogaster CG18362-P...    29   4.8  
AE014134-3380|AAF53989.2| 1119|Drosophila melanogaster CG18362-P...    29   4.8  
AE014134-3379|AAF53988.2| 1119|Drosophila melanogaster CG18362-P...    29   4.8  
AE014134-3378|AAN11111.1| 1070|Drosophila melanogaster CG18362-P...    29   4.8  

>AY051894-1|AAK93318.1|  931|Drosophila melanogaster LD38259p
           protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


>AF264756-1|AAK20948.1|  836|Drosophila melanogaster Mlx interactor
           gamma protein.
          Length = 836

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 290 SLLNDNAYNSIGYKPYPQFKKSA 312


>AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interactor
           beta protein.
          Length = 1062

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


>AF264754-1|AAK20946.1| 1119|Drosophila melanogaster Mlx interactor
           alpha protein.
          Length = 1119

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


>AE014134-3382|AAN11113.1|  836|Drosophila melanogaster CG18362-PD,
           isoform D protein.
          Length = 836

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 290 SLLNDNAYNSIGYKPYPQFKKSA 312


>AE014134-3381|AAN11112.1|  925|Drosophila melanogaster CG18362-PE,
           isoform E protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 379 SLLNDNAYNSIGYKPYPQFKKSA 401


>AE014134-3380|AAF53989.2| 1119|Drosophila melanogaster CG18362-PB,
           isoform B protein.
          Length = 1119

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


>AE014134-3379|AAF53988.2| 1119|Drosophila melanogaster CG18362-PA,
           isoform A protein.
          Length = 1119

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


>AE014134-3378|AAN11111.1| 1070|Drosophila melanogaster CG18362-PC,
           isoform C protein.
          Length = 1070

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 SQLRDPARNSVGYQFHRQFKKAA 290
           S L D A NS+GY+ + QFKK+A
Sbjct: 573 SLLNDNAYNSIGYKPYPQFKKSA 595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,488,517
Number of Sequences: 53049
Number of extensions: 320277
Number of successful extensions: 689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)