Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0897
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    50   2e-08
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    28   0.051
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 49.6 bits (113), Expect = 2e-08
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = +1

Query: 157 IVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLAR-- 330
           I+ P+HL +        Q+  G+++L   R++HRD+   N+LV  N  +K+ DFGL+R  
Sbjct: 588 IIQPKHLLS-----IARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDV 642

Query: 331 VEEPDANKNMTQEVVTQYYRAPEILMGANHYTAAVDVWSVGCIFGELL 474
            ++    KN   ++  ++     +      YT   DVWS G +  E++
Sbjct: 643 YQDNVYCKNGGGKLPVRWMALESLT--HQRYTTYSDVWSFGVLLWEIV 688


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 0.051
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 358 MTQEVVTQYYRAPEILMGANHYTAAVDVWSVGCIFGELLGRRILFQAQSPVQQLELI-TD 534
           M  EV+  Y+       G     + V +++VG ++     RRI +Q +SP+ +L  I TD
Sbjct: 1   MDLEVLEIYFTVANKFSGKLWPISIVLIYTVGVVYS--FKRRIFYQDESPISRLVYIGTD 58

Query: 535 L 537
           L
Sbjct: 59  L 59


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 476 PSSSPNIQPTDQTSTA 429
           PSS+P+  PT +TST+
Sbjct: 77  PSSTPSSLPTQRTSTS 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,216
Number of Sequences: 336
Number of extensions: 3010
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)