BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0896 (701 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 33 0.29 09_06_0081 + 20745627-20748144,20748211-20748308 31 0.67 04_04_1264 - 32227812-32228114,32228199-32228349,32228454-322286... 31 0.67 02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 31 1.2 11_06_0193 - 21132793-21132986,21133376-21133504,21133648-21133681 29 2.7 02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 29 2.7 12_02_0678 + 21868038-21868161,21868256-21868587 29 4.7 07_03_1237 + 25073010-25073513 28 8.3 01_01_0238 - 1976645-1977561,1977649-1977909,1978243-1978275,198... 28 8.3 >06_03_1309 + 29223197-29223240,29223358-29223592,29223695-29223783, 29223870-29223968,29224065-29224158,29224297-29224514, 29224861-29224967,29225298-29225472,29225596-29225743, 29226548-29226596,29228016-29228162,29229990-29229996, 29230417-29230482,29230773-29231991,29232073-29233149, 29233226-29233355,29233519-29233617,29233817-29233878, 29234429-29234533 Length = 1389 Score = 32.7 bits (71), Expect = 0.29 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +3 Query: 453 DSPARISVSCSWPSSPRILIIVSSS--NNWQLA 545 D P R+ C WPS P + ++ +S + WQ+A Sbjct: 666 DDPKRVRARCDWPSCPWVCLLSKNSRTDGWQIA 698 >09_06_0081 + 20745627-20748144,20748211-20748308 Length = 871 Score = 31.5 bits (68), Expect = 0.67 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = +1 Query: 370 QFQFRPTTTRPCWGYTIGRVLDPKPSSRILPLE*ASRVLGRHRHAS 507 +F PTTTRP +GY +L P L A R L H H S Sbjct: 386 RFTVSPTTTRPSFGYDGASLLSATPRMHTTSL--ALRALAPHLHVS 429 >04_04_1264 - 32227812-32228114,32228199-32228349,32228454-32228691, 32228786-32228996,32229077-32229270,32229334-32229450, 32229580-32230522 Length = 718 Score = 31.5 bits (68), Expect = 0.67 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -2 Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGY-VSDYNT 200 DCN+ C P G D A RC C DG+ SD+N+ Sbjct: 179 DCNLYASCGPFGYCD-FTLAIPRCQCLDGFEPSDFNS 214 >02_02_0464 - 10552347-10552466,10552683-10552928,10553866-10554135, 10554231-10554413,10554493-10554688,10554775-10555079, 10555515-10555604,10555689-10555806,10555991-10556088, 10556187-10556272,10557622-10557736 Length = 608 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -2 Query: 679 F*QHKACRSLNRRSEIIIEGNTHECHKTLTPCSTHSDCNL-CREGLANCQLFDEDTIIKM 503 F + K + +E I+EG T++C++ T T L EG F++ II M Sbjct: 328 FREEKLTFRVTESTEEIVEGQTYQCYRYPTMTKTRCGFKLSVTEG-----SFNDSQIIVM 382 Query: 502 RGDDGQEHETLIR 464 G++G T IR Sbjct: 383 LGENGTGKTTFIR 395 >11_06_0193 - 21132793-21132986,21133376-21133504,21133648-21133681 Length = 118 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 331 VTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCR 176 +T L++Y+ C + C G + + RC C DG+ + N DT P R Sbjct: 4 LTNLSIYDPCLLQY-CGDGGSCERSSEFGHRCACHDGFQNLLN-DTSYPCYR 53 >02_03_0084 - 15041261-15041437,15041625-15041765,15042857-15042946, 15043111-15043201,15043953-15044155,15045361-15045438, 15045535-15045651,15046111-15046161,15046405-15046500, 15046726-15046742,15046938-15047064,15050585-15050681, 15051565-15051638,15051910-15051993,15052099-15052290, 15054191-15054319,15055607-15055639,15055747-15055843, 15055940-15055990,15057494-15057564,15058305-15058455, 15058625-15058703,15059265-15059346,15060335-15060335, 15060565-15060620,15060969-15061018,15061511-15061580 Length = 834 Score = 29.5 bits (63), Expect = 2.7 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 433 DPKPSSRILPLE*ASRVLGRHRHAS*LLYLRRTTGSWLILRGTD 564 DP PS LP+ + R H+ A + RRT G+W RG+D Sbjct: 622 DPSPSFHGLPMSSSVRTSPAHQPAH-SMRSRRTGGTWARPRGSD 664 >12_02_0678 + 21868038-21868161,21868256-21868587 Length = 151 Score = 28.7 bits (61), Expect = 4.7 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 412 NPNTGVWLLAETETGFALLCSCLRPGLVT 326 +P G L AE E G +L SC P LVT Sbjct: 59 DPKAGPALAAEAENGSMMLWSCAPPKLVT 87 >07_03_1237 + 25073010-25073513 Length = 167 Score = 27.9 bits (59), Expect = 8.3 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 700 GALSYCGF*QHKACRSLNRRSEIIIEGNTHECHK-TLTPCSTHSDCNLCRE 551 G + GF H+AC +L +R ++ G H H+ TL+ + C CRE Sbjct: 49 GGAACGGFDVHEACLTLPKRVKL---GRRHRDHELTLSVLTASRRCVACRE 96 >01_01_0238 - 1976645-1977561,1977649-1977909,1978243-1978275, 1980556-1981345 Length = 666 Score = 27.9 bits (59), Expect = 8.3 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -2 Query: 310 EDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCRP 173 +DC+ GC G S +C C DG + +T T T P Sbjct: 220 QDCD---GCRRRGGECRFEQLSFQCFCPDGLLCSNSTRTNTTSSHP 262 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,841,042 Number of Sequences: 37544 Number of extensions: 431448 Number of successful extensions: 1309 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1309 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1803843684 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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