Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0896
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.042
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 34 0.13
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.52
SB_786| Best HMM Match : EGF (HMM E-Value=0) 32 0.52
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0) 31 0.90
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_40595| Best HMM Match : Pkinase (HMM E-Value=3.4e-08) 31 1.2
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 30 2.1
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 2.8
SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25) 29 3.6
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.6
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.6
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43225| Best HMM Match : DUF266 (HMM E-Value=5) 29 4.8
SB_20531| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0) 29 4.8
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42) 28 6.4
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 28 6.4
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 28 8.4
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 28 8.4
SB_17371| Best HMM Match : EGF_CA (HMM E-Value=0.36) 28 8.4
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -2
Query: 334 LVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYN------TDTETPYCRP 173
L+T++ +C V G HG ++N S C+C+ G+V D + T ET YC
Sbjct: 771 LITEIAHQNECVVGNGGCQHGCVNN-PEGSYHCICNYGFVLDADRKKCKATTGETAYCGA 829
Query: 172 RTVRDVM 152
+DV+
Sbjct: 830 EWKQDVL 836
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = -2
Query: 391 LLAETETGFALLCSCLRPG--LVTQLNMYEDCNVPVG----CAPHGRIDNINSASIRCVC 230
++A+T++G+ LC+ PG L + ++ D + CAP G + S C C
Sbjct: 482 VVADTDSGYQCLCN---PGYHLDSDPHICSDIDECTSGSHTCAPSGGVCTNTMGSYTCAC 538
Query: 229 DDGYVSDYNTDTETPYC 179
D GY D T+ C
Sbjct: 539 DSGYTGDGQICTDIDEC 555
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 310 EDCNVPVG-CAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
++C+V CAP G N S C C GY D +T T+ C
Sbjct: 764 DECSVGSHTCAPSGSTCTNNVGSYVCTCSTGYSGDGDTCTDIDEC 808
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 304 CNVPVGCAPHGRIDNINSASIRCVCDDGYVSD-YNTDTETPYCRPRTVR 161
C+ CAP G + + S C C+ G++ D YN T + + VR
Sbjct: 847 CSAENSCAPIGSSCTLTNDSYTCACNSGFLGDGYNCTVVTRKGKAQGVR 895
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
CAP G N+ S C C+ GY D T E
Sbjct: 604 CAPIGSSCTNNAGSYTCSCNAGYAGDGETCVE 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCRPRT 167
CAP G + C C+ GY D T T+ C T
Sbjct: 562 CAPSGSTCTNTVGAFTCACNAGYTGDGVTCTDIDECSDGT 601
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C HG NI RC CD+GY ++
Sbjct: 957 CGAHGTCINIQGGDFRCACDEGYTGNH 983
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 310 EDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
++C + P+GR ++ S RCVC+DGY+ D +
Sbjct: 260 DECRMDANACPNGRCIDMPSG-FRCVCNDGYILPTGRDNK 298
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 328 TQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGY 218
T+ + ++C C +GR N+N A RC+C+ GY
Sbjct: 403 TRCDDMDECREKDVCK-NGRCQNVNGA-FRCICNKGY 437
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 337 GLVTQLNMYEDCNV-PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCRPRTVR 161
G +T+ +C+ P C P GR N S RC+CD G+ S YN T R
Sbjct: 74 GKITRCVDVNECDENPNFCRPGGRCVN-TPGSYRCLCDPGFQS-YNGGTVCVDSREDFCF 131
Query: 160 DVMHDES 140
DV +E+
Sbjct: 132 DVFDNEN 138
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 241 RCVCDDGYVSDYNTDTETPYCRPR 170
RC C DGY D T T+ C+ R
Sbjct: 334 RCTCPDGYRGDGRTCTDINECQER 357
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/108 (24%), Positives = 41/108 (37%)
Frame = -2
Query: 349 CLRPGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCRPR 170
C++ G + + + C P C HGR +N +C CD GY N + +C P
Sbjct: 151 CIQEGTESYQCVKKMCE-PNPCQ-HGRCIEVNDDDYQCACDAGYTGK-NCEN---FCSPN 204
Query: 169 TVRDVMHDESFFPRAPCADGQVRLDHPGLNDFYRRHFRLEDICVIDPC 26
++ C V DF H + D+C ++PC
Sbjct: 205 PCKN---------NGVCVSRGVGYHCKCKRDFKGPHCEMVDMCDMNPC 243
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGY--VSDYNTDTE-TPYCRPRTVRDVMHDESFFPRAPCA 116
C+ HG D SA+ +C+CD G+ + + TD TP C R + + ++ C
Sbjct: 1432 CSGHGTCD---SANHKCICDPGWSGIGCHITDCPGTPNCFDRGFCNTTNRDT----PACT 1484
Query: 115 DGQVRLDHPGLNDFYRRHFRLEDICVIDPC 26
D P ND + CV DPC
Sbjct: 1485 DCVKGWMGPACNDPCVHGREVAGSCVCDPC 1514
>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 621
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 535 GSWLILRGTDCNHCVWSTASKFCDIRVY 618
G WL+ + T C H VW A ++ RVY
Sbjct: 518 GEWLLRKATSCEHEVWYQALRWRGERVY 545
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGY 218
+C+ G HG N N S +C+CD GY
Sbjct: 3358 ECDASPGPCVHGECSN-NYGSFKCICDKGY 3386
>SB_40595| Best HMM Match : Pkinase (HMM E-Value=3.4e-08)
Length = 335
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 337 RAVSNCTKERNQFQFRPTTTRPCWGYTIGRVLDPKPSSRILPLE*ASRVLGR-HRHA 504
RA+ ER+Q Q R +TTR G GR+ DP P+E RV R HR A
Sbjct: 217 RALERDRDERHQ-QMRSSTTRALPGTATGRLRDPIGGPAASPVEREKRVSMRLHRGA 272
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 631 IIEGNTHECHKTLTPCSTHSDC 566
+ E N +EC++T +PCS H C
Sbjct: 80 LCEVNVNECNETQSPCSEHGAC 101
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 631 IIEGNTHECHKTLTPCSTHSDC 566
+ E N +EC++T +PCS H C
Sbjct: 659 LCEVNVNECNETQSPCSEHGAC 680
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -2
Query: 421 RSCNPNTGVWLLAETETGFALLCSCLRPGLVTQ--LNMYEDCNVPVGCAPHGRIDN--IN 254
R+C N G TE ++CSC PG + N ED N C G IN
Sbjct: 3369 RTCAVNNGGCSQNCTERDSHVICSCW-PGFELKPFTNKCEDVNE---CLHFGVCSQRCIN 3424
Query: 253 S-ASIRCVCDDGYV 215
+ S +CVC +GYV
Sbjct: 3425 TRGSFKCVCHEGYV 3438
>SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = -2
Query: 244 IRCVCDDGYVS---DYNTDTETPYCRPRTVRDVMHDESFFPRAPCADGQVRLDHPGL--- 83
+R + +DGYV D+ + + PY P +VRD+ + L + L
Sbjct: 313 VRDIREDGYVGCYMDHTPERDLPY--PISVRDITPNACRLACKHSKHAYAGLQYGYLCRC 370
Query: 82 NDFYRRHFRLEDICVIDPCSVDP 14
D Y ++ +L+D PC DP
Sbjct: 371 GDTYGKYAKLDDFQCSSPCKGDP 393
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 462 ARISVSCSWPSSPRILIIVSSSNNWQLANPSRHRLQS-LCVEHGVKVL*HSC 614
A I + + P++PR++ + S W+ + PSR L S L H ++ SC
Sbjct: 2467 ADIKLEATPPATPRLIRVQESPRPWKRSAPSRQVLSSPLFSRHNIRDDLESC 2518
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Frame = -2
Query: 340 PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYV------SDYNTDTETPY 182
P +T + ++C + V P N S C C GY +D N TETPY
Sbjct: 924 PANLTSCDDIDECGLGVATCPASADCVNNDGSYTCRCKRGYTLVNKTCTDVNECTETPY 982
>SB_37317| Best HMM Match : EGF_CA (HMM E-Value=6.6e-25)
Length = 86
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
CAP G N+ S C C+ GY D T E
Sbjct: 12 CAPIGSSCTNNAGSFTCSCNAGYAGDGETCVE 43
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -2
Query: 358 LCSCLRPGLVTQLNMYEDCNVPV----GCAPHGRIDNINSASIRCVCDDGYVSD 209
+C C +PG + N D N + C + DN S S C C +GYV D
Sbjct: 424 MCLC-KPGFINNENACLDRNECLEEENDCDDNAYCDN-TSGSYECYCKEGYVGD 475
>SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -2
Query: 340 PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
P +T + ++C + + P R N S C C GY NT + C
Sbjct: 196 PANLTSCDDIDECKLNISTCPANRYCVNNDGSYTCKCKPGYTLVNNTCEDIDEC 249
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -2
Query: 355 CSCLRPGLVTQLNMYED---CNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
C C +PG N ED C + V P N+ S C C GY NT +T
Sbjct: 230 CKC-KPGYTLVNNTCEDIDECALGVANCPASADCVNNNGSYTCRCKPGYTLVNNTCIDTD 288
Query: 184 YC 179
C
Sbjct: 289 EC 290
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYCRPRTV 164
C PH + N S C C+ GY D T+ C T+
Sbjct: 884 CHPHAQCTN-TKGSFYCTCEKGYSGDGVNCTDIDECNSETL 923
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -2
Query: 340 PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
P +T + ++C + + P R N S C C GY NT + C
Sbjct: 414 PANLTSCDDIDECKLNISTCPANRYCVNNDGSYTCKCKPGYTLVNNTCEDIDEC 467
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -2
Query: 340 PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
P +T + ++C + V P N S C C GY + NT T+ C
Sbjct: 93 PANLTSCDDIDECALGVATCPASADCVNNDGSYTCRCKRGYTLNNNTCTDVNEC 146
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 330 TSPGRKQLHKRA-KPVSVSANNHTPVLGLHDRARSRSKAKQ*DSPARISVSCSWPSSPR 503
T P R + R SVS N HTP L + + S+++ ++P R S P SPR
Sbjct: 857 TPPSRSKKRTRGISGDSVSDNRHTPRRSLRNLSEECSESRSDEAPPRTDASDKVP-SPR 914
>SB_43225| Best HMM Match : DUF266 (HMM E-Value=5)
Length = 154
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 257 DIVDTAVRRAAHGHVAIFVHVKLRNKSGP*ATAQKSETSFSFGQQPHARVGVTRSGAFSI 436
D+V R AA V + V+L +G T ++ S G+Q H++VG S+
Sbjct: 42 DVVQEEARLAAKVQVKRHIRVRLWATTGVEYTMKEGRLSSFLGRQNHSKVGTYDQNLLSV 101
>SB_20531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
CA G I S C C GY D T T TP
Sbjct: 174 CAIEGAICTNTEGSYYCTCQRGYTGDGFTCTATP 207
>SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 299
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -2
Query: 340 PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
P +T + ++C + + P R N S C C GY NT + C
Sbjct: 147 PANLTSCDDIDECKLNISTCPANRYCVNNDGSYTCKCKPGYTLVNNTCEDINEC 200
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -2
Query: 355 CSCLRPGLV---TQLNMYEDCNVPVG-CAPHGRIDNINSASIRCVCDDGYVSD 209
C C +PG + + ++C + C+ G N S RCVC +GY D
Sbjct: 407 CEC-KPGFIGDGSSCTDVDECTTGIAQCSEQGTCVN-TPGSHRCVCHEGYTGD 457
>SB_4760| Best HMM Match : EGF (HMM E-Value=8.29989e-42)
Length = 240
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 349 CLRPGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGY 218
C++ G + + + C P C HGR +N +C CD GY
Sbjct: 192 CIQEGTESYQCVKKMCE-PNPCQ-HGRCIEVNDDDYQCACDAGY 233
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 336 DLLRSLTCTKIATCPWA-ARLTAVSTISTALRSG 238
D+L SLTC I TC A +RL T+S LR+G
Sbjct: 289 DVLLSLTCRHI-TCSIALSRLITTCTVSDTLRNG 321
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -2
Query: 640 SEIIIEGNTHECHKTLTPCSTHSDCNLC----REGLANCQLFDEDTIIKMRGDDGQEHET 473
S ++E C +T P +T C+ +E + F E I K +G D + +T
Sbjct: 1085 SSSLLEQALRFCQQTAKPQATPQSCSSSAVHSQESSLDSHPFPEQDISKTKGQDQETGKT 1144
Query: 472 LIRAGESYCLALDRE 428
GE CL D+E
Sbjct: 1145 ---KGEKECLFPDQE 1156
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
C+ +G + NIN + CVC GY D T + C
Sbjct: 444 CSVNGELRNINRR-LECVCKSGYHGDGVTCEDIDEC 478
>SB_17371| Best HMM Match : EGF_CA (HMM E-Value=0.36)
Length = 38
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 280 PHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
P+GR ++ S RCVC+DGY+ D +
Sbjct: 7 PNGRCIDMPSG-FRCVCNDGYILPTGRDNK 35
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,300,475
Number of Sequences: 59808
Number of extensions: 528509
Number of successful extensions: 1685
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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