Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0895
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF141344-1|AAG49447.1|  119|Homo sapiens LYST-interacting protei...    34   0.50 
L12397-1|AAL58637.1|  350|Homo sapiens Dopamine D4 receptor prot...    34   0.66 
BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.        33   0.88 
AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens ...    33   0.88 
AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens ...    32   2.0  
BC009062-1|AAH09062.1|  198|Homo sapiens Unknown (protein for IM...    32   2.7  
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro...    32   2.7  
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro...    32   2.7  
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.     32   2.7  
M60871-1|AAA51951.1|  219|Homo sapiens cell surface antigen prot...    31   3.5  
M37033-1|AAA35663.1|  219|Homo sapiens CD53 glycoprotein protein.      31   3.5  
BT019643-1|AAV38449.1|  219|Homo sapiens CD53 antigen protein.         31   3.5  
BC040693-1|AAH40693.1|  219|Homo sapiens CD53 molecule protein.        31   3.5  
AL391064-1|CAH73292.1|  219|Homo sapiens CD53 molecule protein.        31   3.5  
AK022118-1|BAB13963.1|  220|Homo sapiens protein ( Homo sapiens ...    31   3.5  
AF200715-1|AAF08006.1|  304|Homo sapiens PTB domain adaptor prot...    31   4.7  
AF191771-1|AAF18975.1|  304|Homo sapiens CED-6 protein protein.        31   4.7  
AC092598-1|AAX93242.1|  171|Homo sapiens unknown protein.              31   4.7  
AB209890-1|BAD93127.1|  146|Homo sapiens GULP, engulfment adapto...    31   4.7  
AF106934-1|AAD31087.1|  873|Homo sapiens vitamin D receptor-inte...    31   6.2  
X55293-1|CAA39005.1|  169|Homo sapiens ultra high-sulphur kerati...    30   8.2  
BC101744-1|AAI01745.2|  169|Homo sapiens keratin associated prot...    30   8.2  
BC069531-1|AAH69531.1|  169|Homo sapiens keratin associated prot...    30   8.2  
AJ006693-1|CAA07189.1|  169|Homo sapiens ultra high sulfer kerat...    30   8.2  
AB126078-1|BAD20205.1|  169|Homo sapiens keratin associated prot...    30   8.2  

>AF141344-1|AAG49447.1|  119|Homo sapiens LYST-interacting protein
           LIP8 protein.
          Length = 119

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = +3

Query: 315 CRTGTSSWRTSP----RTCCPSDTSCAPRGAGTSSKNSP-GPRSC*ESSLMKPSRSARKT 479
           CR GTSSWR+S     + C P    C P G   +S ++P   R   +  LM P     ++
Sbjct: 18  CRVGTSSWRSSGWSWWKDCRP---CCRPTGMRPTSCSAPLSRRPTLKLLLMDPPAPGLRS 74

Query: 480 PSKRRSSCRL 509
           P +RR    L
Sbjct: 75  PRRRRGGXGL 84


>L12397-1|AAL58637.1|  350|Homo sapiens Dopamine D4 receptor
           protein.
          Length = 350

 Score = 33.9 bits (74), Expect = 0.66
 Identities = 26/69 (37%), Positives = 31/69 (44%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKT 479
           GPSCC     SSW TS R C      C PRG      ++P P     ++   PS +   T
Sbjct: 284 GPSCCAGR-PSSWCTSRRRCV-LPAPC-PRGW-----SAPSPGWATSTAPSTPSSTLSST 335

Query: 480 PSKRRSSCR 506
           PS   SS R
Sbjct: 336 PSSATSSAR 344


>BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.
          Length = 257

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +3

Query: 327 TSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRSSC 503
           +SS   SPR+  PS +S +     TSS +S  P S   SS    +   R+  S + S C
Sbjct: 195 SSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSSCPSAALGRRPQSPQSSHC 253



 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 321 TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRSS 500
           + + S  +S  +  PS +S +P  + +SS +SP   S   SS    S S+  +PS    S
Sbjct: 114 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 173


>AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35107 fis, clone PLACE6006871, moderately
           similar to SUPPRESSOR PROTEIN SRP40. ).
          Length = 258

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +3

Query: 327 TSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRSSC 503
           +SS   SPR+  PS +S +     TSS +S  P S   SS    +   R+  S + S C
Sbjct: 196 SSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSSCPSAALGRRPQSPQSSHC 254



 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 321 TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRSS 500
           + + S  +S  +  PS +S +P  + +SS +SP   S   SS    S S+  +PS    S
Sbjct: 115 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 174


>AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23447 fis, clone HSI03346. ).
          Length = 363

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +3

Query: 315 CRTGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC 434
           CRT TSS R SP   CP+  +C P    TS+  S  P++C
Sbjct: 21  CRT-TSS-RNSPTMSCPASVACEP---STSTTTSSPPKAC 55


>BC009062-1|AAH09062.1|  198|Homo sapiens Unknown (protein for
           IMAGE:3875076) protein.
          Length = 198

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 321 TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRS 497
           + +SS  +S  +   S +S +   + +SS +SP P      +L KP+   +  P +RRS
Sbjct: 63  SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRS 121


>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
          Length = 2752

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 321  TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRS 497
            + +SS  +S  +   S +S +   + +SS +SP P      +L KP+   +  P +RRS
Sbjct: 2617 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRS 2675


>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
          Length = 1275

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 321  TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRS 497
            + +SS  +S  +   S +S +   + +SS +SP P      +L KP+   +  P +RRS
Sbjct: 1140 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRS 1198


>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
          Length = 2800

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 321  TGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKTPSKRRS 497
            + +SS  +S  +   S +S +   + +SS +SP P      +L KP+   +  P +RRS
Sbjct: 2665 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRS 2723


>M60871-1|AAA51951.1|  219|Homo sapiens cell surface antigen
           protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 CCCRTGTSSWRTSPRTCCPSD 371
           CC   GTS W + P   CPSD
Sbjct: 144 CCGINGTSDWTSGPPASCPSD 164


>M37033-1|AAA35663.1|  219|Homo sapiens CD53 glycoprotein protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 CCCRTGTSSWRTSPRTCCPSD 371
           CC   GTS W + P   CPSD
Sbjct: 144 CCGINGTSDWTSGPPASCPSD 164


>BT019643-1|AAV38449.1|  219|Homo sapiens CD53 antigen protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 CCCRTGTSSWRTSPRTCCPSD 371
           CC   GTS W + P   CPSD
Sbjct: 144 CCGINGTSDWTSGPPASCPSD 164


>BC040693-1|AAH40693.1|  219|Homo sapiens CD53 molecule protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 CCCRTGTSSWRTSPRTCCPSD 371
           CC   GTS W + P   CPSD
Sbjct: 144 CCGINGTSDWTSGPPASCPSD 164


>AL391064-1|CAH73292.1|  219|Homo sapiens CD53 molecule protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 CCCRTGTSSWRTSPRTCCPSD 371
           CC   GTS W + P   CPSD
Sbjct: 144 CCGINGTSDWTSGPPASCPSD 164


>AK022118-1|BAB13963.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12056 fis, clone HEMBB1002050. ).
          Length = 220

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 26/76 (34%), Positives = 30/76 (39%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCPSDTSCAPRGAGTSSKNSPGPRSC*ESSLMKPSRSARKT 479
           GP    R     W   PR   P     A RG G +S+  PGP     S L +P  S   T
Sbjct: 100 GPGIASREVPRPW---PRVASPLPRPPARRGPGIASREVPGPWPRVASPLPRPPASPCPT 156

Query: 480 PSKRRSSCRLLDGSGR 527
            S+  S  R L   GR
Sbjct: 157 -SQTTSVRRRLPSPGR 171


>AF200715-1|AAF08006.1|  304|Homo sapiens PTB domain adaptor protein
           CED-6 protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 540 TQPPPVPSRRGVYRRIFFSKAFFSHFSMASSD 445
           TQPPPVPSR    +R  F    F  F+  ++D
Sbjct: 237 TQPPPVPSRSTEIKRDLFGAEPFDPFNCGAAD 268


>AF191771-1|AAF18975.1|  304|Homo sapiens CED-6 protein protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 540 TQPPPVPSRRGVYRRIFFSKAFFSHFSMASSD 445
           TQPPPVPSR    +R  F    F  F+  ++D
Sbjct: 237 TQPPPVPSRSTEIKRDLFGAEPFDPFNCGAAD 268


>AC092598-1|AAX93242.1|  171|Homo sapiens unknown protein.
          Length = 171

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 540 TQPPPVPSRRGVYRRIFFSKAFFSHFSMASSD 445
           TQPPPVPSR    +R  F    F  F+  ++D
Sbjct: 104 TQPPPVPSRSTEIKRDLFGAEPFDPFNCGAAD 135


>AB209890-1|BAD93127.1|  146|Homo sapiens GULP, engulfment adaptor
           PTB domain containing 1 variant protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 540 TQPPPVPSRRGVYRRIFFSKAFFSHFSMASSD 445
           TQPPPVPSR    +R  F    F  F+  ++D
Sbjct: 61  TQPPPVPSRSTEIKRDLFGAEPFDPFNCGAAD 92


>AF106934-1|AAD31087.1|  873|Homo sapiens vitamin D
           receptor-interacting protein protein.
          Length = 873

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 315 CRTGTSSWRTSPRTCCPS-DTSCAPRGAGTSSKNSPGPRS 431
           C +  S W TS  TC P+  TS AP  +    ++ P PRS
Sbjct: 614 CSSSCSGWATSCCTCWPAYPTSPAPPRSPAPPRSPPPPRS 653


>X55293-1|CAA39005.1|  169|Homo sapiens ultra high-sulphur keratin
           protein protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCP---SDTSCAPRGAGT--SSKNSPGPRSC*ESSLMKP 458
           GPSCC       +   P  CC    S +SC  RG G+   SK   G   C + S  KP
Sbjct: 32  GPSCCAPV----YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKP 85


>BC101744-1|AAI01745.2|  169|Homo sapiens keratin associated protein
           5-9 protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCP---SDTSCAPRGAGT--SSKNSPGPRSC*ESSLMKP 458
           GPSCC       +   P  CC    S +SC  RG G+   SK   G   C + S  KP
Sbjct: 32  GPSCCAPV----YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKP 85


>BC069531-1|AAH69531.1|  169|Homo sapiens keratin associated protein
           5-9 protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCP---SDTSCAPRGAGT--SSKNSPGPRSC*ESSLMKP 458
           GPSCC       +   P  CC    S +SC  RG G+   SK   G   C + S  KP
Sbjct: 32  GPSCCAPV----YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKP 85


>AJ006693-1|CAA07189.1|  169|Homo sapiens ultra high sulfer keratin
           protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCP---SDTSCAPRGAGT--SSKNSPGPRSC*ESSLMKP 458
           GPSCC       +   P  CC    S +SC  RG G+   SK   G   C + S  KP
Sbjct: 32  GPSCCAPV----YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKP 85


>AB126078-1|BAD20205.1|  169|Homo sapiens keratin associated protein
           protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 300 GPSCCCRTGTSSWRTSPRTCCP---SDTSCAPRGAGT--SSKNSPGPRSC*ESSLMKP 458
           GPSCC       +   P  CC    S +SC  RG G+   SK   G   C + S  KP
Sbjct: 32  GPSCCAPV----YCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKP 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,728,016
Number of Sequences: 237096
Number of extensions: 2179456
Number of successful extensions: 6506
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6464
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)