Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0894
(704 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 93 8e-21
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 74 5e-15
AY341150-1|AAR13714.1| 164|Anopheles gambiae aminopeptidase N p... 26 1.3
AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N p... 26 1.3
AY341148-1|AAR13712.1| 164|Anopheles gambiae aminopeptidase N p... 26 1.3
AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N p... 26 1.3
AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N p... 26 1.3
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 25 2.3
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 25 3.1
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 24 4.1
AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding pr... 23 7.1
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 23 9.4
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 9.4
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 93.1 bits (221), Expect = 8e-21
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 2/160 (1%)
Frame = -3
Query: 501 YYQNVRGLRTKVLEFSRNLLLCSYDVIILTETWLTDGILDSELFNEHYTVWRRDRNSDLT 322
YYQNVRGLRTK EF + +D+I LTETWL D I + LFN +++V+R DR+ L+
Sbjct: 83 YYQNVRGLRTKTKEFHLAVSEADFDLIALTETWLVDNIPSALLFNNNFSVYRCDRS--LS 140
Query: 321 G-QSRGGGVLIATRKDLKVSLQPSFNSSVEDLWVTLIVELKRETIKLHICVLYLCKQ-GS 148
G SRGGGVL+A + PS + S+E + V + L++ V+Y+ Q S
Sbjct: 141 GSSSRGGGVLLAVSNAYESIELPSRDRSLE----YICVRVACNNAHLYVMVVYIPPQLSS 196
Query: 147 RLSFSEQLTNYLTKLTNIVLDNSLDKFLLVGDFNLSGITW 28
+S L + ++ T + L S D ++GDFN I+W
Sbjct: 197 EISTLRSLHDCISSFT-LRLKPS-DLLFVIGDFNQPSISW 234
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 546 TIQRTKVIFLNSIHIYYQNVRGLRTKVLEFSRNLLLCSYD 427
T++R K + + + +YQ R R++ + F + L CSY+
Sbjct: 410 TLKRLKRV-KRAAYRHYQTRRCQRSRSIYFDTHSLYCSYN 448
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 73.7 bits (173), Expect = 5e-15
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Frame = -3
Query: 504 IYYQNVRGLRTKVLEFSRNLLLCSYDVIILTETWLTDGI-LDSELFNEHYTVWRRDRNSD 328
IYYQNVRGLRTK E + ++++ LTETWL + I + L ++ Y ++R DR+
Sbjct: 9 IYYQNVRGLRTKYNELRLSANESGFEMLALTETWLNESIPSNMVLDSDSYNIYRCDRSRL 68
Query: 327 LTGQSRGGGVLIATRKDLKVSLQPSFNSSVEDLWVTLIVELKRETIKLHICVLYLCKQ-G 151
+SRGGGVL+A S+ + N + L + + +L++ ++Y+
Sbjct: 69 NNERSRGGGVLLACSSRYP-SVALNMNQPTLE---ALCIRVSFPKFRLYVGIVYVPPYLS 124
Query: 150 SRLSFSEQLTNYLTKLTNIVLDNSLDKFLLVGDFNLSGITWLPS 19
S ++ E L+ ++ + N D +L+GDFN + W P+
Sbjct: 125 SDRNYFESLSAFIXDAYMHMKPN--DHLILLGDFNQPALGWSPA 166
>AY341150-1|AAR13714.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 51 NHQQVGIYQVNYPKQCW 101
N QQ G Y+VNY + W
Sbjct: 119 NPQQTGYYRVNYDENLW 135
>AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 51 NHQQVGIYQVNYPKQCW 101
N QQ G Y+VNY + W
Sbjct: 119 NPQQTGYYRVNYDENLW 135
>AY341148-1|AAR13712.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 51 NHQQVGIYQVNYPKQCW 101
N QQ G Y+VNY + W
Sbjct: 119 NPQQTGYYRVNYDENLW 135
>AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 51 NHQQVGIYQVNYPKQCW 101
N QQ G Y+VNY + W
Sbjct: 119 NPQQTGYYRVNYDENLW 135
>AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.8 bits (54), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 51 NHQQVGIYQVNYPKQCW 101
N QQ G Y+VNY + W
Sbjct: 119 NPQQTGYYRVNYDENLW 135
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 620 PETVPGLSVTTLELNQQTRGRHS 552
P T PGL+VT + R RHS
Sbjct: 250 PPTSPGLNVTAVGFGHTGRQRHS 272
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 105 LTNIVLDNS-LDKFLLVGDFNLSGITW 28
L NIVL S KF++ GDFN +W
Sbjct: 103 LDNIVLTVSGSSKFVVAGDFNAWSSSW 129
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 24.2 bits (50), Expect = 4.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 629 RHTPETVPGLSVTTLELNQQTRGRHSDKRFRELKLY 522
+HT GL ++L R H +KR LKL+
Sbjct: 38 KHTIPLETGLGWQQIDLTNAVRQWHGEKRNDSLKLF 73
>AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP36 protein.
Length = 277
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 113 R*LVNCSEKDNLEPCLHKYNTHIC 184
R LVN ++ N EPC+ Y C
Sbjct: 109 RCLVNLPQECNGEPCVQAYRAFQC 132
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 23.0 bits (47), Expect = 9.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 369 NEHYTVWRRDRNSDLTGQSRGGGVLIAT 286
N H R +NSD+ RGG + AT
Sbjct: 408 NMHILQMIRRQNSDMLHGPRGGSAIAAT 435
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +2
Query: 65 RNLSSELSKTMLVSFVR*LVNCSEKDNLEPCLHKYNTHICSLIVSRFNSTMSV 223
+NL + ++VS + + N + +++++ C+ +N H +V N+T+ V
Sbjct: 1238 KNLHGNYTLELIVSDLGGVPNTA-RESVDICVTDFNDHAPVFVVPSGNTTVKV 1289
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,381
Number of Sequences: 2352
Number of extensions: 13934
Number of successful extensions: 35
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -