Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0893
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.71 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 188 NLVEPHCLQSHTQGPVRYIYMCRCSSSREGRLNSQ 84
           NLV  +C  ++    +R ++ CRC   +   L  Q
Sbjct: 156 NLVYVYCCDNNFNVFLRQVFTCRCKDYKNEDLEDQ 190


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 516 FLIRPGTILSVCKNVC 563
           F  RPGT+     N+C
Sbjct: 502 FACRPGTVFHTQSNIC 517


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 304 LYICMYVYVYMCTLDRHNTFKTRRWKHK 221
           LY C +  + +  L R+   K + W+++
Sbjct: 145 LYNCFHSTLLLMILSRYQRLKAQLWQNR 172


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 131 YMCRCSSSREGRLNSQT 81
           +MCRC    EG   SQ+
Sbjct: 166 FMCRCPPDWEGTTLSQS 182


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 207  VIYIDLCFQRRVLNV 251
            + Y+D  FQRRV  +
Sbjct: 1387 IFYLDEAFQRRVTQI 1401


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 207  VIYIDLCFQRRVLNV 251
            + Y+D  FQRRV  +
Sbjct: 1387 IFYLDEAFQRRVTQI 1401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,300
Number of Sequences: 336
Number of extensions: 3251
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)