Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0893
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    36   0.093
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    32   1.5  
AK022586-1|BAB14113.1|  355|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AF084928-1|AAC67543.1|  395|Homo sapiens erythroblast macrophage...    31   2.7  

>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 36.3 bits (80), Expect = 0.093
 Identities = 19/67 (28%), Positives = 38/67 (56%)
 Frame = -1

Query: 469 LFVS*NFNSKLYLY*IAICTHERRQSHVSADWALVTR*LYKAMDI*YIYARTKTILYICM 290
           +F+  + ++ +Y Y   IC H     H+ A +A +   +Y  M   Y+Y+ T+  ++IC+
Sbjct: 111 IFIYTHMHTYVYSY-ARICIH--MYIHIHA-YACICMFMYAHMRA-YVYSYTRICIHICI 165

Query: 289 YVYVYMC 269
           ++Y Y+C
Sbjct: 166 FIYTYVC 172


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -1

Query: 304 LYICMYVYVYMCTLDRHNTFKTRRWKHKSIYI-TYIINKRIS*NRTVYNHTHKVPSDIYI 128
           +YICMY + YMCT       +   + HK +Y+ TYI          VY +T+ V   I+I
Sbjct: 31  IYICMYTHRYMCT-------RKHMYTHKHMYVYTYIY---------VYTYTY-VCVHIHI 73

Query: 127 CVGVRL 110
           CV + L
Sbjct: 74  CVHIYL 79


>AK022586-1|BAB14113.1|  355|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12524 fis, clone NT2RM2002145, moderately
           similar to Homo sapiens erythroblast macrophage protein
           EMP mRNA. ).
          Length = 355

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 431 ILNCNLYTRAATVARERRLGSCYPVTVQSYGYIIYIRQNK 312
           +L C  Y  A  +AR+  + SC   +++   +I  IRQNK
Sbjct: 133 LLRCGYYNTAVKLARQSGIESCLEFSLRIQEFIELIRQNK 172


>AF084928-1|AAC67543.1|  395|Homo sapiens erythroblast macrophage
           protein EMP protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 431 ILNCNLYTRAATVARERRLGSCYPVTVQSYGYIIYIRQNK 312
           +L C  Y  A  +AR+  + SC   +++   +I  IRQNK
Sbjct: 122 LLRCGYYNTAVKLARQSGIESCLEFSLRIQEFIELIRQNK 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,260,413
Number of Sequences: 237096
Number of extensions: 1631575
Number of successful extensions: 7089
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7072
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)