BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0892 (503 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 35 0.029 M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 35 0.029 Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.16 U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 33 0.16 DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 33 0.16 U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 31 0.63 U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 0.63 DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 0.63 Z68493-9|CAA92796.1| 338|Caenorhabditis elegans Hypothetical pr... 29 1.9 Z78012-10|CAJ55252.1| 183|Caenorhabditis elegans Hypothetical p... 29 2.5 Z78012-9|CAB01419.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.5 Z75954-10|CAJ55258.1| 183|Caenorhabditis elegans Hypothetical p... 29 2.5 Z75954-9|CAB00110.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.5 U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 28 3.3 Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.4 L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 4.4 AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 4.4 U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 27 5.8 U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 27 5.8 U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical pr... 27 5.8 U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical pr... 27 5.8 Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 27 7.7 Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 27 7.7 U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 7.7 >Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein F29D11.1 protein. Length = 4753 Score = 35.1 bits (77), Expect = 0.029 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 425 FCNGKPDCKDESHENALHCPT 487 FCNG+ DC+D S E+ CPT Sbjct: 3812 FCNGQDDCRDNSDEDKQRCPT 3832 Score = 30.3 bits (65), Expect = 0.83 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 428 CNGKPDCKDESHENALHCPT 487 C+ KPDC D S EN +C T Sbjct: 2812 CDSKPDCADASDENPNYCNT 2831 Score = 29.1 bits (62), Expect = 1.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +3 Query: 168 EGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKN 308 E +C D C Q ++ + C G D+D++TC NVK+ Sbjct: 1438 ENECLDSSSCSQRCKDEKHGF-TCSCDEGYELDVDKRTCKVADNVKD 1483 >M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related protein protein. Length = 4753 Score = 35.1 bits (77), Expect = 0.029 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 425 FCNGKPDCKDESHENALHCPT 487 FCNG+ DC+D S E+ CPT Sbjct: 3812 FCNGQDDCRDNSDEDKQRCPT 3832 Score = 30.3 bits (65), Expect = 0.83 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 428 CNGKPDCKDESHENALHCPT 487 C+ KPDC D S EN +C T Sbjct: 2812 CDSKPDCADASDENPNYCNT 2831 Score = 29.1 bits (62), Expect = 1.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +3 Query: 168 EGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKN 308 E +C D C Q ++ + C G D+D++TC NVK+ Sbjct: 1438 ENECLDSSSCSQRCKDEKHGF-TCSCDEGYELDVDKRTCKVADNVKD 1483 >Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical protein C07G2.1a protein. Length = 584 Score = 32.7 bits (71), Expect = 0.16 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = +3 Query: 96 AGDEP----NADQLCDGRPADEYFRLTTEGDCRD-VVRCDQGLENSVTRLASVRCPGGLA 260 A DEP + C G+ AD ++ G+C D C G L ++CP LA Sbjct: 200 AADEPVTRSAVTKSCVGK-ADGFYSF---GECSDHYTACSNGY------LIPMQCPARLA 249 Query: 261 FDIDRQTCDWKTNVKNC 311 FD R CD+ NV C Sbjct: 250 FDEARVICDYVMNVPEC 266 >U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical protein R02F2.4 protein. Length = 431 Score = 32.7 bits (71), Expect = 0.16 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNC-DQIEKPR 332 CP L F+ +CDW NV +C ++ EKP+ Sbjct: 207 CPANLVFNPAISSCDWPKNVMDCSEKSEKPQ 237 Score = 32.3 bits (70), Expect = 0.21 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314 CP GL F Q CD++ NV CD Sbjct: 268 CPDGLMFSEKNQMCDYEWNVDECD 291 Score = 27.5 bits (58), Expect = 5.8 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317 CP L + + + CDW+ NV C + Sbjct: 55 CPEDLVYHKNLEFCDWRHNVFECGE 79 >DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin proteoglycan-1 protein. Length = 584 Score = 32.7 bits (71), Expect = 0.16 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = +3 Query: 96 AGDEP----NADQLCDGRPADEYFRLTTEGDCRD-VVRCDQGLENSVTRLASVRCPGGLA 260 A DEP + C G+ AD ++ G+C D C G L ++CP LA Sbjct: 200 AADEPVTRSAVTKSCVGK-ADGFYSF---GECSDHYTACSNGY------LIPMQCPARLA 249 Query: 261 FDIDRQTCDWKTNVKNC 311 FD R CD+ NV C Sbjct: 250 FDEARVICDYVMNVPEC 266 >U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical protein C39D10.7 protein. Length = 1185 Score = 30.7 bits (66), Expect = 0.63 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +3 Query: 174 DCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKNCDQIEKPRKVLP 344 DC D E ++ R CP GL + CD+K +V++C + + P Sbjct: 799 DCEDYYISCNNFETTINR-----CPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTP 850 Score = 29.1 bits (62), Expect = 1.9 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPRKVLPILKTDQPI 368 CP GL + + CD K NV+ C + + P +QP+ Sbjct: 718 CPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATP--AAEQPV 757 Score = 28.3 bits (60), Expect = 3.3 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +3 Query: 156 RLTTEGDCRDVVRCDQGL-ENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKNCDQ 317 ++T + D V+C + S +L CP L + +D+ CD+ +VK+C + Sbjct: 204 KVTGDMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPE 258 Score = 28.3 bits (60), Expect = 3.3 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +3 Query: 225 RLASVRCPGGLAFDIDRQTCDWKTNVKNC 311 ++ + CP L F+ CD+ TNV++C Sbjct: 598 QVVATTCPANLIFNPYVGECDYSTNVRDC 626 Score = 27.1 bits (57), Expect = 7.7 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +3 Query: 105 EPNADQLCDGRPADEYFRLTTEGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTC 284 E D C G+P +Y + E + C G R + CPG L F+ TC Sbjct: 426 EVKVDFDCTGKPNGKYIK---EACTKSFFTCHDG------RAFANDCPGDLVFNKATGTC 476 Query: 285 DWKTN 299 D+ N Sbjct: 477 DFAEN 481 >U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical protein B0280.5 protein. Length = 524 Score = 30.7 bits (66), Expect = 0.63 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317 CP L +D D Q C WK+ V+ C + Sbjct: 168 CPTPLFYDADSQKCIWKSLVEECKE 192 Score = 29.9 bits (64), Expect = 1.1 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317 CP GL F CD+++NV C + Sbjct: 337 CPAGLKFSESTVRCDYESNVSECQE 361 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPR 332 CP L F+ CDW +V C + P+ Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306 Score = 27.1 bits (57), Expect = 7.7 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314 CP L ++ CDW+ NV C+ Sbjct: 54 CPADLIYNEPLLICDWRHNVIGCE 77 >DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin proteoglycan-2 protein. Length = 524 Score = 30.7 bits (66), Expect = 0.63 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317 CP L +D D Q C WK+ V+ C + Sbjct: 168 CPTPLFYDADSQKCIWKSLVEECKE 192 Score = 29.9 bits (64), Expect = 1.1 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317 CP GL F CD+++NV C + Sbjct: 337 CPAGLKFSESTVRCDYESNVSECQE 361 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPR 332 CP L F+ CDW +V C + P+ Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306 Score = 27.1 bits (57), Expect = 7.7 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314 CP L ++ CDW+ NV C+ Sbjct: 54 CPADLIYNEPLLICDWRHNVIGCE 77 >Z68493-9|CAA92796.1| 338|Caenorhabditis elegans Hypothetical protein C33A12.13 protein. Length = 338 Score = 29.1 bits (62), Expect = 1.9 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -1 Query: 335 FSWLFYLIAILNIRFPITSL 276 FS+LF+ LNIRFP T L Sbjct: 81 FSYLFFFFDYLNIRFPATGL 100 >Z78012-10|CAJ55252.1| 183|Caenorhabditis elegans Hypothetical protein F58H1.7b protein. Length = 183 Score = 28.7 bits (61), Expect = 2.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 428 CNGKPDCKDESHENALHC 481 C+G PDC DE EN C Sbjct: 55 CDGSPDCSDEYDENKSMC 72 >Z78012-9|CAB01419.1| 185|Caenorhabditis elegans Hypothetical protein F58H1.7a protein. Length = 185 Score = 28.7 bits (61), Expect = 2.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 428 CNGKPDCKDESHENALHC 481 C+G PDC DE EN C Sbjct: 57 CDGSPDCSDEYDENKSMC 74 >Z75954-10|CAJ55258.1| 183|Caenorhabditis elegans Hypothetical protein F58H1.7b protein. Length = 183 Score = 28.7 bits (61), Expect = 2.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 428 CNGKPDCKDESHENALHC 481 C+G PDC DE EN C Sbjct: 55 CDGSPDCSDEYDENKSMC 72 >Z75954-9|CAB00110.1| 185|Caenorhabditis elegans Hypothetical protein F58H1.7a protein. Length = 185 Score = 28.7 bits (61), Expect = 2.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 428 CNGKPDCKDESHENALHC 481 C+G PDC DE EN C Sbjct: 57 CDGSPDCSDEYDENKSMC 74 >U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein 1 protein. Length = 617 Score = 28.3 bits (60), Expect = 3.3 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 174 DCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCD 287 DC +RC G+ + CP GL+F D CD Sbjct: 577 DCLKFIRCVNGISYNF------ECPNGLSFHADTMMCD 608 >Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein ZC101.2f protein. Length = 2389 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein ZC101.2e protein. Length = 3375 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein ZC101.2c protein. Length = 2295 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein ZC101.2a protein. Length = 2482 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein ZC101.2b protein. Length = 1160 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein ZC101.2f protein. Length = 2389 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein ZC101.2e protein. Length = 3375 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein ZC101.2c protein. Length = 2295 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein ZC101.2a protein. Length = 2482 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane proteoglycan protein. Length = 2481 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 413 EKELFCNGKPDCKDESHENALHCP 484 + + C+G+PDC+D S E +CP Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184 >AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density lipoprotein receptorrelated protein 2 protein. Length = 2192 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 Query: 428 CNGKPDCKDESHENALHC 481 C+G DC D S EN +HC Sbjct: 1192 CDGIRDCFDGSDENPIHC 1209 >U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical protein ZC317.7 protein. Length = 574 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 363 PICPEGKLALWQRRLHLKKNCSVMVNQTAKMNP 461 P CP G LAL Q+ L + M+N A M P Sbjct: 166 PYCPPGLLALKQKSLATMQLPVTMINPNAGMYP 198 >U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical protein C14C11.2 protein. Length = 574 Score = 27.5 bits (58), Expect = 5.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 363 PICPEGKLALWQRRLHLKKNCSVMVNQTAKMNP 461 P CP G LAL Q+ L + M+N A M P Sbjct: 166 PYCPPGLLALKQKSLATMQLPVTMINPNAGMYP 198 >U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical protein C31H2.1b protein. Length = 639 Score = 27.5 bits (58), Expect = 5.8 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 303 KNCDQIEKPRKVLPILKTDQPICPEGKLALWQRRLHLK 416 K ++ EK +K+ I +TD P+C E + LW+ + K Sbjct: 141 KRLNRYEKVKKI--IRRTDWPVCHEIRANLWKELCNTK 176 >U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical protein C31H2.1a protein. Length = 696 Score = 27.5 bits (58), Expect = 5.8 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 303 KNCDQIEKPRKVLPILKTDQPICPEGKLALWQRRLHLK 416 K ++ EK +K+ I +TD P+C E + LW+ + K Sbjct: 198 KRLNRYEKVKKI--IRRTDWPVCHEIRANLWKELCNTK 233 >Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein H02I12.1 protein. Length = 1319 Score = 27.1 bits (57), Expect = 7.7 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +3 Query: 225 RLASVRCPGGLAFDIDRQTCDWKTNVKNC 311 R + CP G F+ CDW + V +C Sbjct: 1268 RKVVMTCPSGTVFNPLLSVCDWPSAVPSC 1296 >Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical protein W02A2.3 protein. Length = 397 Score = 27.1 bits (57), Expect = 7.7 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 243 CPGGLAFDIDRQTCDWKTN 299 C G FD+ Q C W TN Sbjct: 310 CAPGTVFDVQSQVCVWDTN 328 >U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (unfertilizable) protein2 protein. Length = 548 Score = 27.1 bits (57), Expect = 7.7 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 428 CNGKPDCKDESHENALHCPT 487 C+G PDC D S E+ C T Sbjct: 272 CDGIPDCDDGSDEHQCDCKT 291 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,852,334 Number of Sequences: 27780 Number of extensions: 241569 Number of successful extensions: 948 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 948 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 967231538 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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