Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0892
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 35 0.029
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 35 0.029
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.16
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 33 0.16
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 33 0.16
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 31 0.63
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 0.63
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 0.63
Z68493-9|CAA92796.1| 338|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z78012-10|CAJ55252.1| 183|Caenorhabditis elegans Hypothetical p... 29 2.5
Z78012-9|CAB01419.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z75954-10|CAJ55258.1| 183|Caenorhabditis elegans Hypothetical p... 29 2.5
Z75954-9|CAB00110.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.5
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 28 3.3
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 4.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 4.4
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 27 5.8
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 27 5.8
U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical pr... 27 5.8
U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 27 7.7
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 7.7
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 35.1 bits (77), Expect = 0.029
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 425 FCNGKPDCKDESHENALHCPT 487
FCNG+ DC+D S E+ CPT
Sbjct: 3812 FCNGQDDCRDNSDEDKQRCPT 3832
Score = 30.3 bits (65), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHCPT 487
C+ KPDC D S EN +C T
Sbjct: 2812 CDSKPDCADASDENPNYCNT 2831
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 168 EGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKN 308
E +C D C Q ++ + C G D+D++TC NVK+
Sbjct: 1438 ENECLDSSSCSQRCKDEKHGF-TCSCDEGYELDVDKRTCKVADNVKD 1483
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 35.1 bits (77), Expect = 0.029
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 425 FCNGKPDCKDESHENALHCPT 487
FCNG+ DC+D S E+ CPT
Sbjct: 3812 FCNGQDDCRDNSDEDKQRCPT 3832
Score = 30.3 bits (65), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHCPT 487
C+ KPDC D S EN +C T
Sbjct: 2812 CDSKPDCADASDENPNYCNT 2831
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 168 EGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKN 308
E +C D C Q ++ + C G D+D++TC NVK+
Sbjct: 1438 ENECLDSSSCSQRCKDEKHGF-TCSCDEGYELDVDKRTCKVADNVKD 1483
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +3
Query: 96 AGDEP----NADQLCDGRPADEYFRLTTEGDCRD-VVRCDQGLENSVTRLASVRCPGGLA 260
A DEP + C G+ AD ++ G+C D C G L ++CP LA
Sbjct: 200 AADEPVTRSAVTKSCVGK-ADGFYSF---GECSDHYTACSNGY------LIPMQCPARLA 249
Query: 261 FDIDRQTCDWKTNVKNC 311
FD R CD+ NV C
Sbjct: 250 FDEARVICDYVMNVPEC 266
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNC-DQIEKPR 332
CP L F+ +CDW NV +C ++ EKP+
Sbjct: 207 CPANLVFNPAISSCDWPKNVMDCSEKSEKPQ 237
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314
CP GL F Q CD++ NV CD
Sbjct: 268 CPDGLMFSEKNQMCDYEWNVDECD 291
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317
CP L + + + CDW+ NV C +
Sbjct: 55 CPEDLVYHKNLEFCDWRHNVFECGE 79
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +3
Query: 96 AGDEP----NADQLCDGRPADEYFRLTTEGDCRD-VVRCDQGLENSVTRLASVRCPGGLA 260
A DEP + C G+ AD ++ G+C D C G L ++CP LA
Sbjct: 200 AADEPVTRSAVTKSCVGK-ADGFYSF---GECSDHYTACSNGY------LIPMQCPARLA 249
Query: 261 FDIDRQTCDWKTNVKNC 311
FD R CD+ NV C
Sbjct: 250 FDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 30.7 bits (66), Expect = 0.63
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 174 DCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKNCDQIEKPRKVLP 344
DC D E ++ R CP GL + CD+K +V++C + + P
Sbjct: 799 DCEDYYISCNNFETTINR-----CPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTP 850
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPRKVLPILKTDQPI 368
CP GL + + CD K NV+ C + + P +QP+
Sbjct: 718 CPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATP--AAEQPV 757
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 156 RLTTEGDCRDVVRCDQGL-ENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKNCDQ 317
++T + D V+C + S +L CP L + +D+ CD+ +VK+C +
Sbjct: 204 KVTGDMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPE 258
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 225 RLASVRCPGGLAFDIDRQTCDWKTNVKNC 311
++ + CP L F+ CD+ TNV++C
Sbjct: 598 QVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 105 EPNADQLCDGRPADEYFRLTTEGDCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTC 284
E D C G+P +Y + E + C G R + CPG L F+ TC
Sbjct: 426 EVKVDFDCTGKPNGKYIK---EACTKSFFTCHDG------RAFANDCPGDLVFNKATGTC 476
Query: 285 DWKTN 299
D+ N
Sbjct: 477 DFAEN 481
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 30.7 bits (66), Expect = 0.63
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317
CP L +D D Q C WK+ V+ C +
Sbjct: 168 CPTPLFYDADSQKCIWKSLVEECKE 192
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317
CP GL F CD+++NV C +
Sbjct: 337 CPAGLKFSESTVRCDYESNVSECQE 361
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPR 332
CP L F+ CDW +V C + P+
Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314
CP L ++ CDW+ NV C+
Sbjct: 54 CPADLIYNEPLLICDWRHNVIGCE 77
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 30.7 bits (66), Expect = 0.63
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317
CP L +D D Q C WK+ V+ C +
Sbjct: 168 CPTPLFYDADSQKCIWKSLVEECKE 192
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQ 317
CP GL F CD+++NV C +
Sbjct: 337 CPAGLKFSESTVRCDYESNVSECQE 361
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCDQIEKPR 332
CP L F+ CDW +V C + P+
Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTNVKNCD 314
CP L ++ CDW+ NV C+
Sbjct: 54 CPADLIYNEPLLICDWRHNVIGCE 77
>Z68493-9|CAA92796.1| 338|Caenorhabditis elegans Hypothetical
protein C33A12.13 protein.
Length = 338
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 335 FSWLFYLIAILNIRFPITSL 276
FS+LF+ LNIRFP T L
Sbjct: 81 FSYLFFFFDYLNIRFPATGL 100
>Z78012-10|CAJ55252.1| 183|Caenorhabditis elegans Hypothetical
protein F58H1.7b protein.
Length = 183
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHC 481
C+G PDC DE EN C
Sbjct: 55 CDGSPDCSDEYDENKSMC 72
>Z78012-9|CAB01419.1| 185|Caenorhabditis elegans Hypothetical
protein F58H1.7a protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHC 481
C+G PDC DE EN C
Sbjct: 57 CDGSPDCSDEYDENKSMC 74
>Z75954-10|CAJ55258.1| 183|Caenorhabditis elegans Hypothetical
protein F58H1.7b protein.
Length = 183
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHC 481
C+G PDC DE EN C
Sbjct: 55 CDGSPDCSDEYDENKSMC 72
>Z75954-9|CAB00110.1| 185|Caenorhabditis elegans Hypothetical
protein F58H1.7a protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHC 481
C+G PDC DE EN C
Sbjct: 57 CDGSPDCSDEYDENKSMC 74
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 174 DCRDVVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCD 287
DC +RC G+ + CP GL+F D CD
Sbjct: 577 DCLKFIRCVNGISYNF------ECPNGLSFHADTMMCD 608
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 413 EKELFCNGKPDCKDESHENALHCP 484
+ + C+G+PDC+D S E +CP
Sbjct: 163 KNDYVCDGEPDCRDRSDE--ANCP 184
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHC 481
C+G DC D S EN +HC
Sbjct: 1192 CDGIRDCFDGSDENPIHC 1209
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 363 PICPEGKLALWQRRLHLKKNCSVMVNQTAKMNP 461
P CP G LAL Q+ L + M+N A M P
Sbjct: 166 PYCPPGLLALKQKSLATMQLPVTMINPNAGMYP 198
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 363 PICPEGKLALWQRRLHLKKNCSVMVNQTAKMNP 461
P CP G LAL Q+ L + M+N A M P
Sbjct: 166 PYCPPGLLALKQKSLATMQLPVTMINPNAGMYP 198
>U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical
protein C31H2.1b protein.
Length = 639
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 303 KNCDQIEKPRKVLPILKTDQPICPEGKLALWQRRLHLK 416
K ++ EK +K+ I +TD P+C E + LW+ + K
Sbjct: 141 KRLNRYEKVKKI--IRRTDWPVCHEIRANLWKELCNTK 176
>U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical
protein C31H2.1a protein.
Length = 696
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 303 KNCDQIEKPRKVLPILKTDQPICPEGKLALWQRRLHLK 416
K ++ EK +K+ I +TD P+C E + LW+ + K
Sbjct: 198 KRLNRYEKVKKI--IRRTDWPVCHEIRANLWKELCNTK 233
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 225 RLASVRCPGGLAFDIDRQTCDWKTNVKNC 311
R + CP G F+ CDW + V +C
Sbjct: 1268 RKVVMTCPSGTVFNPLLSVCDWPSAVPSC 1296
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 243 CPGGLAFDIDRQTCDWKTN 299
C G FD+ Q C W TN
Sbjct: 310 CAPGTVFDVQSQVCVWDTN 328
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 428 CNGKPDCKDESHENALHCPT 487
C+G PDC D S E+ C T
Sbjct: 272 CDGIPDCDDGSDEHQCDCKT 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,852,334
Number of Sequences: 27780
Number of extensions: 241569
Number of successful extensions: 948
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -