Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0892
(503 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid t... 31 0.44
At4g34440.1 68417.m04894 protein kinase family protein contains ... 30 1.0
At3g23590.1 68416.m02967 expressed protein 29 1.8
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 2.4
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 28 3.1
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 27 5.4
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 27 7.2
At3g14240.1 68416.m01803 subtilase family protein contains simil... 27 7.2
At2g15350.1 68415.m01756 xyloglucan fucosyltransferase, putative... 27 7.2
At1g68570.1 68414.m07834 proton-dependent oligopeptide transport... 27 7.2
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 27 9.5
At2g18880.1 68415.m02203 fibronectin type III domain-containing ... 27 9.5
>At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 208
Score = 31.1 bits (67), Expect = 0.44
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 67 LV*SDKMTTELEMSRTLISCATVDPPMNISVSPPKVTAAMSSGATRA*RTASPGSPQCAA 246
LV + +M EL +R L + +S++PP ++SGAT ASP SP A
Sbjct: 94 LVSAGEMGIELNSTRALAT----PKACKLSIAPPHC-GIITSGATTP--GASPVSPSAGA 146
Query: 247 PAVSPS 264
P SPS
Sbjct: 147 PTTSPS 152
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 139 PPMNISVSPPKVTAAMS-SGATRA*RTASPGSPQCAAPAV-SPSIST 273
PP +IS PP ++A+ S A T+ P SP + P V +PS T
Sbjct: 40 PPSSISAPPPDISASFSPPPAPPTQETSPPTSPSSSPPVVANPSPQT 86
>At3g23590.1 68416.m02967 expressed protein
Length = 1309
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 PWLDTRFCVSVCY*LVRWYAVLLV*SDKMTTELEMSR-TLISCATVDPPMNISVSPPK-V 174
P LDTR C+S+C +V L+ K + +E R L++ V ++PPK V
Sbjct: 391 PRLDTRLCMSLC--IVPLVVANLIEEGKYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCV 448
Query: 175 TAAMSSGATRA 207
+A + AT+A
Sbjct: 449 VSAANKAATKA 459
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 84 DDDGAGDEPNADQLCDGRPADEYFRLTTEGDC--RDVVR 194
DDD GDE + D D P+ + RL E +C R V+R
Sbjct: 646 DDDDDGDEDDDDDDDDVDPSSKDIRLEEENECENRAVIR 684
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 154 SVSPPKVTAAMSSGATRA*RTASPGSPQCAAPAVSPSIS 270
S SP +A S + A +ASP + A+P+VSPS S
Sbjct: 684 SASPSTSPSASPSVSPSAFPSASPSASPSASPSVSPSAS 722
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 112 TLISCATVDPPMNISVSPPKVTAAMSSGATRA*RTASPGSPQCAAPAVSPSIS 270
T I T+ PP I++ PP +T +++ T P P P P ++
Sbjct: 70 TTIPPPTLTPPPVITIPPPTLTPPVTNPVTNPVTQYPPTQPSGTVPVPVPVVA 122
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 139 PPMNISVSPPKVTAAMSSGATRA*RTASPGSPQCAAPAVSPS 264
PP + +VSPP TA S T + T SP SP P +PS
Sbjct: 36 PPWDHNVSPPPETAP-SPTPTSSPSTTSPPSP---GPVAAPS 73
>At3g14240.1 68416.m01803 subtilase family protein contains
similarity to SBT1 GI:1771160 from [Lycopersicon
esculentum]
Length = 775
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 186 VVRCDQGLENSVTRLASVRCPGGLAFDIDRQTCDWKTNVKNC 311
+V CD+G+ + T+ VR GGL I D + V +C
Sbjct: 401 IVLCDRGINSRATKGEIVRKNGGLGMIIANGVFDGEGLVADC 442
>At2g15350.1 68415.m01756 xyloglucan fucosyltransferase, putative
(FUT10) identical to SP|Q9SJP6 Putative
fucosyltransferase 10 (EC 2.4.1.-) (AtFUT10) (Fragment)
{Arabidopsis thaliana}; similar to xyloglucan
fucosyltransferase GI:5231145 from [Arabidopsis
thaliana]
Length = 440
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 144 DEYFRLTTEGDCRDVV-RCDQGLENSVTRLASV 239
DEY+ + G+CR +V GL N + LASV
Sbjct: 37 DEYYASESNGECRYIVWLARDGLGNRLITLASV 69
>At1g68570.1 68414.m07834 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 596
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 323 KATKSFTNLENGPTYLS*R*IGFVAAEIA 409
K + FT LE G T+L IGFV + IA
Sbjct: 398 KVARKFTGLERGITFLHRMGIGFVISIIA 426
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 490 SSWTVQSIFMGFIFAVWFTITEQFFFKCNLRC 395
S W + F F WF QF+F+C C
Sbjct: 25 SRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYC 56
>At2g18880.1 68415.m02203 fibronectin type III domain-containing
protein contains Pfam profile PF00041: Fibronectin type
III domain
Length = 417
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 165 W*DGNIHRRVYRRTTDQRSAHLQLRRHL--VASHEKYCI 55
W D N +R VYR+ +++ S+ L R L +SH+++ +
Sbjct: 226 WGDTNHYRMVYRKVSEKHSSK-DLTRELFSTSSHQRFTV 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,042,668
Number of Sequences: 28952
Number of extensions: 214418
Number of successful extensions: 682
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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