BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0890 (687 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ... 29 0.48 SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 1.9 SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 27 2.5 SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr... 27 3.4 SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 4.4 SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 23 5.8 SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 25 7.8 SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 7.8 >SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 598 Score = 29.5 bits (63), Expect = 0.48 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%) Frame = -3 Query: 346 DGFVEVLPYDAV-----HKRLERVGVLAVDVHDWAAAALFSQT 233 DGFV++LPYD V + L R+G+ + W A F +T Sbjct: 247 DGFVKILPYDRVFSDAKNSNLTRIGISSKT--SWCIATSFGET 287 >SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 335 Score = 27.5 bits (58), Expect = 1.9 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 Query: 80 YLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYV 208 YL+ +L PN Y Q A + +DY E IRI+E V Sbjct: 32 YLLRSLLANVPNALYHSQLQAACQKFQDYCDLEEIRIIEAKRV 74 >SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|||Manual Length = 512 Score = 27.1 bits (57), Expect = 2.5 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 327 SHMTRFTNDSNELVYSLWMFMIGQ 256 SH +F ND E Y W F+ Q Sbjct: 203 SHTYKFVNDKGEFYYCKWHFITNQ 226 >SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr 3|||Manual Length = 162 Score = 26.6 bits (56), Expect = 3.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 209 GMNNEYRISLAKKGGGCPIMNIHS 280 G++NE I L +K G CP + I+S Sbjct: 105 GLSNENLIKLTQKSGECPPLYINS 128 >SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual Length = 175 Score = 26.2 bits (55), Expect = 4.4 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -1 Query: 576 LKIIKFNELLKYVQQ 532 LKIIKFN+L KYV + Sbjct: 142 LKIIKFNKLAKYVYE 156 >SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr 1|||Manual Length = 513 Score = 23.0 bits (47), Expect(2) = 5.8 Identities = 13/49 (26%), Positives = 21/49 (42%) Frame = +2 Query: 5 FCVKLGTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALR 151 +C G + V D +++ ++ + P P KFLA ALR Sbjct: 263 YCTGDGHKMVMSIGGSTVDLDLVQIHPTGFVDPKDPTALTKFLAAEALR 311 Score = 21.0 bits (42), Expect(2) = 5.8 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = +2 Query: 161 DYVPHEVIRIVEPSYVGMNN 220 DYV E++++ P Y+ +N+ Sbjct: 333 DYVTGEMMKLKSPVYLVLNS 352 >SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizosaccharomyces pombe|chr 2|||Manual Length = 785 Score = 25.4 bits (53), Expect = 7.8 Identities = 8/33 (24%), Positives = 19/33 (57%) Frame = -3 Query: 187 SDYFVGHVVFFPPKSVLSEELVAPVGACGFEVG 89 +D GH + PP+ + +++A + +C ++G Sbjct: 558 ADLKFGHYMKLPPRIMFYTQMIATIWSCFVQIG 590 >SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1436 Score = 25.4 bits (53), Expect = 7.8 Identities = 14/53 (26%), Positives = 22/53 (41%) Frame = -3 Query: 496 LINVLITMYSVLIRRTSEQRRVWCKLLYFENERNLN*DFLFFGRVCADVNDGF 338 L N+L+ + R C LL+F+ L ++ F VC + GF Sbjct: 623 LNNILVASLKFYFNLLHRKVRNGCALLHFKETEILEGEWDFLLAVCPHIEHGF 675 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,769,142 Number of Sequences: 5004 Number of extensions: 55521 Number of successful extensions: 131 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 131 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 317927284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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