BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0890 (687 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 31 1.0 Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 30 1.8 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 4.1 AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 4.1 U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 7.2 Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 27 9.5 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 9.5 U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 27 9.5 AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 27 9.5 >AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical protein Y38H6C.17 protein. Length = 454 Score = 30.7 bits (66), Expect = 1.0 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 294 ELVYSLWMFMIGQPPPFLARLILYSLFMP 208 E + +W F+ G PPPF +++ F+P Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179 >Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical protein C03E10.5 protein. Length = 623 Score = 29.9 bits (64), Expect = 1.8 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 39 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT-CPTK*SELWSHPT 206 T++P T K T TS+PTS + T A ++ + TT CPTK HPT Sbjct: 181 TSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYGFHPT 236 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 29.1 bits (62), Expect = 3.1 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = +3 Query: 39 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 218 T +P TT T T++PT+ APT T++ T TT T + + PT T Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT--TPTTTTTVPTTTTTTPTTTTT 229 Query: 219 TNT 227 T T Sbjct: 230 TTT 232 Score = 28.3 bits (60), Expect = 5.4 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +3 Query: 39 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 218 T +P TT T T++PT+ PT T+ + T TT PT ++ + PT T Sbjct: 221 TTTPTTTT----TTTTTPTTTTTTPTTTTTPATTT--SETTTTTPTTTTQTTTKPTTTTT 274 Query: 219 TNT 227 T T Sbjct: 275 TPT 277 Score = 27.5 bits (58), Expect = 9.5 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 39 TASPL*TTKR*WTCTSSPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPTWA* 215 T +P TT T T++PT+ PT T++ + T TT PT + + T Sbjct: 151 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210 Query: 216 TTNT 227 TT T Sbjct: 211 TTTT 214 >Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 28.7 bits (61), Expect = 4.1 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -3 Query: 190 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAV 38 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL 1529 >Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 28.7 bits (61), Expect = 4.1 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -3 Query: 190 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAV 38 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL 1529 >Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 28.7 bits (61), Expect = 4.1 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -3 Query: 190 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAV 38 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL 1529 >AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical protein F56D6.15 protein. Length = 395 Score = 28.7 bits (61), Expect = 4.1 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +3 Query: 63 KR*WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 164 K + C+ PT P A PT T++++N LGG++T Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148 >U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical protein F37A4.4 protein. Length = 1163 Score = 27.9 bits (59), Expect = 7.2 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -1 Query: 312 FTNDSNELVYSLWMFMIGQPPPFLARLILYSLFMPT*DGSTILITS 175 FT++ +L+++ G+ + R YSLFM DG +LI S Sbjct: 787 FTSNGRNQYINLYLYYFGKTSDYEKRW-RYSLFMDRVDGKNVLIDS 831 >Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical protein K08H10.4 protein. Length = 479 Score = 27.5 bits (58), Expect = 9.5 Identities = 19/84 (22%), Positives = 33/84 (39%) Frame = -3 Query: 310 HKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSE 131 HK V A D+ + + N V HVG+ + D+F H+ F + + Sbjct: 195 HKPAAHRSVAAFDLGGGSTQLTYWPNNEA-VFSEHVGYERDIDFFGHHIRLFTHSFLGNG 253 Query: 130 ELVAPVGACGFEVGDEVHVHHLLV 59 + A + E +E+ H L+ Sbjct: 254 LIAARLNILQLETDNEIESTHQLI 277 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 27.5 bits (58), Expect = 9.5 Identities = 22/56 (39%), Positives = 28/56 (50%) Frame = +3 Query: 39 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPT 206 T SP +T+ T TS P+S+P T + SSS T + TT K S L S T Sbjct: 1978 TPSPSQSTES--TQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGT 2031 >U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical protein K04E7.1 protein. Length = 178 Score = 27.5 bits (58), Expect = 9.5 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3 Query: 247 LFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACG 101 L++ + V+V ++ WLH S G+V FP + L LV CG Sbjct: 45 LYAVSFVVYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92 >AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical protein Y113G7B.7 protein. Length = 314 Score = 27.5 bits (58), Expect = 9.5 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = +2 Query: 158 EDYVPHEVIRIVEPSYVGMNN 220 +D + EV+R+ +PSY+G +N Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,295,716 Number of Sequences: 27780 Number of extensions: 314095 Number of successful extensions: 820 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 813 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1571291122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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