BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0890 (687 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 8.3 AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 8.3 AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 8.3 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.3 >U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor protein. Length = 95 Score = 21.4 bits (43), Expect = 8.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 454 RTSEQRRVWCKLLYFENERN 395 R RRV C LL F+ + N Sbjct: 37 RADRHRRVTCDLLSFKGQVN 56 >AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin precursor protein. Length = 95 Score = 21.4 bits (43), Expect = 8.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 454 RTSEQRRVWCKLLYFENERN 395 R RRV C LL F+ + N Sbjct: 37 RADRHRRVTCDLLSFKGQVN 56 >AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. Length = 57 Score = 21.4 bits (43), Expect = 8.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 Query: 454 RTSEQRRVWCKLLYFENERN 395 R RRV C LL F+ + N Sbjct: 12 RADRHRRVTCDLLSFKGQVN 31 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.4 bits (43), Expect = 8.3 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%) Frame = +2 Query: 50 IVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIR-----IVEPSYVGM 214 + N + + ++ +L P N Y +A++ L E + V+ IVEP+ V + Sbjct: 660 VTNMDQYNSILMIEHLSPDH-NGNYSCVARN-LAAEVSHTQRLVVHVPPRWIVEPTDVSV 717 Query: 215 NNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGT 361 ++L + G P I + +S + E Y I+ GT Sbjct: 718 ERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGT 766 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 184,618 Number of Sequences: 438 Number of extensions: 3745 Number of successful extensions: 12 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -