Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0890
         (687 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g43245.1 68414.m04985 expressed protein                             29   2.2  
At2g38670.1 68415.m04749 ethanolamine-phosphate cytidylyltransfe...    27   8.8  
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa...    27   8.8  
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa...    27   8.8  

>At1g43245.1 68414.m04985 expressed protein
          Length = 558

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 62  QEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYVGMN 217
           QE +D +L  N+ P       + +  H ++++ED  PH  +R+    YV +N
Sbjct: 321 QEAIDDFLSDNIDPKTCCEMIESVLHHGIQFKEDSQPH-CLRLHACHYVALN 371


>At2g38670.1 68415.m04749 ethanolamine-phosphate
           cytidylyltransferase, putative / phosphorylethanolamine
           transferase, putative / CTP:phosphoethanolamine
           cytidylyltransferase, putative similar to SP|Q99447
           Ethanolamine-phosphate cytidylyltransferase (EC
           2.7.7.14) {Homo sapiens}; contains Pfam profile PF01467:
           Cytidylyltransferase
          Length = 421

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 206 VGMNNEYRISLAKKGGGCPIMNIH 277
           VG++N+  +S AK+G   PIMN+H
Sbjct: 286 VGIHNDQTVS-AKRGAHRPIMNLH 308


>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase family
            protein contains similarity to phosphatidylinositol
            4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
            taurus] GI:2198791; contains Pfam profiles PF00454:
            Phosphatidylinositol 3- and 4-kinase, PF00613:
            Phosphoinositide 3-kinase family, accessory domain
          Length = 2028

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = -3

Query: 334  EVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFF 155
            E LPY    K +E   VL   +  WAA ++       F+  A+ G      Y +  +  +
Sbjct: 1530 EALPYFVTPKNVEENSVLLQQLPHWAACSITQALE--FLTPAYKGHPRVMAYVLRVLESY 1587

Query: 154  PPKSV 140
            PP+ V
Sbjct: 1588 PPERV 1592


>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase family
            protein contains similarity to phosphatidylinositol
            4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
            taurus] GI:2198791; contains Pfam profiles PF00454:
            Phosphatidylinositol 3- and 4-kinase, PF00613:
            Phosphoinositide 3-kinase family, accessory domain
          Length = 2028

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = -3

Query: 334  EVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFF 155
            E LPY    K +E   VL   +  WAA ++       F+  A+ G      Y +  +  +
Sbjct: 1530 EALPYFVTPKNVEENSVLLQQLPHWAACSITQALE--FLTPAYKGHPRVMAYVLRVLESY 1587

Query: 154  PPKSV 140
            PP+ V
Sbjct: 1588 PPERV 1592


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,308,863
Number of Sequences: 28952
Number of extensions: 287390
Number of successful extensions: 696
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)