Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0889
         (589 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7K8M4 Cluster: Putative uncharacterized protein z264R;...    35   1.2  
UniRef50_Q4RG95 Cluster: Chromosome 12 SCAF15104, whole genome s...    33   3.7  
UniRef50_UPI0000EBD871 Cluster: PREDICTED: hypothetical protein;...    33   4.9  
UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma j...    33   4.9  
UniRef50_Q5ZB07 Cluster: Myosin heavy chain-like; n=4; Oryza sat...    32   8.6  
UniRef50_A4RGD3 Cluster: Predicted protein; n=1; Magnaporthe gri...    32   8.6  

>UniRef50_A7K8M4 Cluster: Putative uncharacterized protein z264R;
           n=1; Chlorella virus ATCV-1|Rep: Putative
           uncharacterized protein z264R - Chlorella virus ATCV-1
          Length = 157

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
 Frame = -2

Query: 510 TFSKRAPLLHCGTSPG*CWQRRLKNSKINRTIVLRFSLCLG--CPARGR-RTRCCLDAIL 340
           TF + AP    G +P  C+ R  KN++       R+SLC G  C +    R  CC    L
Sbjct: 53  TFDRGAPAYFQGRTPMSCFARSSKNTRTISPWAYRWSLCWGTSCFSISEPRGVCCAGDFL 112

Query: 339 CIPRAGGDRITSNRTRMFLIYV 274
              R G D    N+   FL Y+
Sbjct: 113 NFLRGGSD----NKPPFFLEYI 130


>UniRef50_Q4RG95 Cluster: Chromosome 12 SCAF15104, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 12 SCAF15104, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1433

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -2

Query: 588 QRTGCCSWAIPCQSADLLLFPLSLGHTFSKRAPLLHCGTSPG 463
           +R GC S A+P  S+ +  FPLSL      +A   HCG + G
Sbjct: 607 ERLGCTSVAVPAISSGVFGFPLSLCADTIAQAVWEHCGAAGG 648


>UniRef50_UPI0000EBD871 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 191

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -1

Query: 526 PLVGPYFFETGSPSPLRYXSGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLLPRR 347
           P +GPY   +G P+P R+ + L L  SS     ++            P++R  DS  P +
Sbjct: 111 PRLGPYLSVSGPPAPARHCAALPLRGSSMALAGRTQACPD-------PTNRASDSPAPGQ 163

Query: 346 DPMHTARRRR 317
               ++RRRR
Sbjct: 164 PSAESSRRRR 173


>UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08917 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 256

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -1

Query: 364 SLLPRRDPMHTARRRRPDNIEQNPHVPNLRDPCICADTRDIL---IKTKNSEIYLSVGLN 194
           S+LP  DP+   R R  D++   P V  L DP +  D  DI    IK  + EI LS+   
Sbjct: 108 SVLPSCDPIPEKRARIEDSLSCAPSVVTLTDPVVNND-NDIYEEGIKNNSEEIVLSIPYE 166

Query: 193 R 191
           R
Sbjct: 167 R 167


>UniRef50_Q5ZB07 Cluster: Myosin heavy chain-like; n=4; Oryza
           sativa|Rep: Myosin heavy chain-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 755

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 322 RRPDNIEQNPHVPNLRDPCICADTRDILIKTKNSEIYLSVGLNRPIPASFLYKLYV 155
           R  D  E N  +P L DP      +++LIK  + ++  S+G  RPI A  +Y+  +
Sbjct: 333 RGVDIHENNSQLPGLNDPEAEKQQQELLIKCISEDLGFSIG--RPIAAYLIYRCLI 386


>UniRef50_A4RGD3 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 156

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 358 LPRRDPMHTARRRRPDNIEQNPHVPNLRDPCIC 260
           +PR  P HTA R R  NIE++  +P     C+C
Sbjct: 115 VPRNHPQHTAPRMRQYNIERDGCIPEGGKCCMC 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,203,644
Number of Sequences: 1657284
Number of extensions: 12092436
Number of successful extensions: 28172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28164
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)