Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0889
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075309-1|AAL68176.1|  420|Drosophila melanogaster AT31826p pro...    31   0.88 
AE014297-4599|AAF57051.1|  420|Drosophila melanogaster CG2224-PA...    31   0.88 
AY118893-1|AAM50753.1|  695|Drosophila melanogaster LD02947p pro...    30   2.7  
AE014297-1269|AAF54615.1|  695|Drosophila melanogaster CG10703-P...    30   2.7  

>AY075309-1|AAL68176.1|  420|Drosophila melanogaster AT31826p
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 23/59 (38%), Positives = 30/59 (50%)
 Frame = -1

Query: 532 LSPLVGPYFFETGSPSPLRYXSGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLL 356
           L  +V P  F TG+   L   SGL+L A+SE   DK+ +    F  +  PS    DSLL
Sbjct: 186 LDQVVYPNDFPTGANRSLP-GSGLLLPAASEAATDKTTNSKPSFDRNQKPSYNRTDSLL 243


>AE014297-4599|AAF57051.1|  420|Drosophila melanogaster CG2224-PA
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 23/59 (38%), Positives = 30/59 (50%)
 Frame = -1

Query: 532 LSPLVGPYFFETGSPSPLRYXSGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLL 356
           L  +V P  F TG+   L   SGL+L A+SE   DK+ +    F  +  PS    DSLL
Sbjct: 186 LDQVVYPNDFPTGANRSLP-GSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDSLL 243


>AY118893-1|AAM50753.1|  695|Drosophila melanogaster LD02947p
           protein.
          Length = 695

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 LQTTLPTSARTXTAMEKGSPFRKSMAQREGKEQKIGTLTGDSPGAAACP 585
           L+T+L   A      E GSP R+  +++   +   G   G +PG  A P
Sbjct: 43  LETSLAAHAEATAVGESGSPARELESKKTSTDSADGATEGAAPGPPAPP 91


>AE014297-1269|AAF54615.1|  695|Drosophila melanogaster CG10703-PA
           protein.
          Length = 695

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 LQTTLPTSARTXTAMEKGSPFRKSMAQREGKEQKIGTLTGDSPGAAACP 585
           L+T+L   A      E GSP R+  +++   +   G   G +PG  A P
Sbjct: 43  LETSLAAHAEATAVGESGSPARELESKKTSTDSADGATEGAAPGPPAPP 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,216,372
Number of Sequences: 53049
Number of extensions: 565978
Number of successful extensions: 1066
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)