Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0886
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81197-1|CAA57071.1| 511|Homo sapiens archain protein. 258 1e-68
BC093638-1|AAH93638.1| 511|Homo sapiens archain protein. 258 1e-68
BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein. 258 1e-68
BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein. 253 4e-67
X81198-1|CAA57072.1| 472|Homo sapiens archain protein. 191 2e-48
Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protei... 34 0.43
BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein. 34 0.43
BC009606-1|AAH09606.1| 164|Homo sapiens AP1S3 protein protein. 34 0.43
AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein. 34 0.43
AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein... 34 0.43
AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related prot... 34 0.43
AC093884-1|AAY24166.1| 143|Homo sapiens unknown protein. 34 0.43
DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specifi... 34 0.57
BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein... 34 0.57
AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated pro... 34 0.57
AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein... 34 0.57
BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein pr... 33 0.75
BT006738-1|AAP35384.1| 157|Homo sapiens adaptor-related protein... 32 2.3
BC071867-1|AAH71867.1| 157|Homo sapiens adaptor-related protein... 32 2.3
BC001117-1|AAH01117.1| 157|Homo sapiens adaptor-related protein... 32 2.3
AF251295-1|AAG44595.1| 181|Homo sapiens DC22 protein. 32 2.3
AF087876-1|AAP97176.1| 157|Homo sapiens clathrin-associated pro... 32 2.3
AB015320-1|BAA33392.1| 157|Homo sapiens sigma1B subunit of AP-1... 32 2.3
BX537780-1|CAD97839.1| 132|Homo sapiens hypothetical protein pr... 31 3.0
M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth f... 30 9.2
J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth f... 30 9.2
BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth... 30 9.2
AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens ... 30 9.2
AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth... 30 9.2
>X81197-1|CAA57071.1| 511|Homo sapiens archain protein.
Length = 511
Score = 258 bits (633), Expect = 1e-68
Identities = 123/178 (69%), Positives = 147/178 (82%)
Frame = +3
Query: 48 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 227
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 228 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 407
++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E E+ F+L+FAFDEIVALG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 408 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQ 581
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ LQ+ R +A ++G+
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGK 178
>BC093638-1|AAH93638.1| 511|Homo sapiens archain protein.
Length = 511
Score = 258 bits (633), Expect = 1e-68
Identities = 123/178 (69%), Positives = 147/178 (82%)
Frame = +3
Query: 48 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 227
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 228 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 407
++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E E+ F+L+FAFDEIVALG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 408 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQ 581
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ LQ+ R +A ++G+
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGK 178
>BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein.
Length = 511
Score = 258 bits (633), Expect = 1e-68
Identities = 123/178 (69%), Positives = 147/178 (82%)
Frame = +3
Query: 48 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 227
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 228 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 407
++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E E+ F+L+FAFDEIVALG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 408 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQ 581
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ LQ+ R +A ++G+
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGK 178
>BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein.
Length = 189
Score = 253 bits (620), Expect = 4e-67
Identities = 118/151 (78%), Positives = 137/151 (90%)
Frame = +3
Query: 48 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 227
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 228 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 407
++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E E+ F+L+FAFDEIVALG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 408 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 500
YRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQ 151
>X81198-1|CAA57072.1| 472|Homo sapiens archain protein.
Length = 472
Score = 191 bits (466), Expect = 2e-48
Identities = 90/139 (64%), Positives = 110/139 (79%)
Frame = +3
Query: 165 MTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTE 344
M G+QHTFVETESVRYVYQP++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L E
Sbjct: 1 MNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEE 60
Query: 345 TEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXX 524
E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++AVR+TQ
Sbjct: 61 NEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEM 120
Query: 525 XXXXXXLQRERLEAAKRGQ 581
LQ+ R +A ++G+
Sbjct: 121 RRKAKELQQARRDAERQGK 139
>Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protein 2
protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.43
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 417 SVNLAQVRSFVEMDS 461
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.43
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 417 SVNLAQVRSFVEMDS 461
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>BC009606-1|AAH09606.1| 164|Homo sapiens AP1S3 protein protein.
Length = 164
Score = 34.3 bits (75), Expect = 0.43
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +3
Query: 162 LMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 341
L G R +FV+ + ++ VY+ LY N L LE + + ++ +Y +
Sbjct: 40 LSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVC 99
Query: 342 ETEVLNQAFNLLFAFDEIVALG-YRESVNLAQVRSFVEMDSHEE 470
E +++ F DE + G +E+ V++ + D +E
Sbjct: 100 ELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQE 143
>AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein.
Length = 154
Score = 34.3 bits (75), Expect = 0.43
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +3
Query: 162 LMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 341
L G R +FV+ + ++ VY+ LY N L LE + + ++ +Y +
Sbjct: 40 LSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVC 99
Query: 342 ETEVLNQAFNLLFAFDEIVALG-YRESVNLAQVRSFVEMDSHEE 470
E +++ F DE + G +E+ V++ + D +E
Sbjct: 100 ELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQE 143
>AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein
complex AP-4 mu4 subunit protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.43
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 417 SVNLAQVRSFVEMDS 461
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related protein
2 protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.43
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 417 SVNLAQVRSFVEMDS 461
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>AC093884-1|AAY24166.1| 143|Homo sapiens unknown protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.43
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +3
Query: 162 LMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 341
L G R +FV+ + ++ VY+ LY N L LE + + ++ +Y +
Sbjct: 40 LSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVC 99
Query: 342 ETEVLNQAFNLLFAFDEIVALG-YRESVNLAQVRSFVEMDSHEE 470
E +++ F DE + G +E+ V++ + D +E
Sbjct: 100 ELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQE 143
>DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specific
adaptor-related protein 1 mu1 subunit protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.57
Identities = 24/137 (17%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 60 AATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDK 236
A V GK L+ R + ++ + +E + + G + VR+++ +
Sbjct: 5 AVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNN 64
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY++ + K + + L +V EY +L E + + + DE++ GY +
Sbjct: 65 LYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQ 124
Query: 417 SVNLAQVRSFVEMDSHE 467
+ + ++ ++ + H+
Sbjct: 125 TTDSKILQEYITQEGHK 141
>BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.57
Identities = 24/137 (17%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 60 AATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDK 236
A V GK L+ R + ++ + +E + + G + VR+++ +
Sbjct: 5 AVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNN 64
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY++ + K + + L +V EY +L E + + + DE++ GY +
Sbjct: 65 LYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQ 124
Query: 417 SVNLAQVRSFVEMDSHE 467
+ + ++ ++ + H+
Sbjct: 125 TTDSKILQEYITQEGHK 141
>AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated
protein AP47 protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.57
Identities = 24/137 (17%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 60 AATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDK 236
A V GK L+ R + ++ + +E + + G + VR+++ +
Sbjct: 5 AVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNN 64
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY++ + K + + L +V EY +L E + + + DE++ GY +
Sbjct: 65 LYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQ 124
Query: 417 SVNLAQVRSFVEMDSHE 467
+ + ++ ++ + H+
Sbjct: 125 TTDSKILQEYITQEGHK 141
>AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit variant protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.57
Identities = 24/137 (17%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 60 AATVCTKSGKALVSRQFV-EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDK 236
A V GK L+ R + ++ + +E + + G + VR+++ +
Sbjct: 36 AVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNN 95
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY++ + K + + L +V EY +L E + + + DE++ GY +
Sbjct: 96 LYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQ 155
Query: 417 SVNLAQVRSFVEMDSHE 467
+ + ++ ++ + H+
Sbjct: 156 TTDSKILQEYITQEGHK 172
>BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein
protein.
Length = 192
Score = 33.5 bits (73), Expect = 0.75
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 237 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 416
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 49 LYLVVTTSENVSPFSLLELLSGLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 108
Query: 417 SVNLAQVRSFVEMDS 461
+ + +R+F++ ++
Sbjct: 109 TTSTEMLRNFIQTEA 123
>BT006738-1|AAP35384.1| 157|Homo sapiens adaptor-related protein
complex 1, sigma 2 subunit protein.
Length = 157
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 22 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 75
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 76 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 135
>BC071867-1|AAH71867.1| 157|Homo sapiens adaptor-related protein
complex 1, sigma 2 subunit protein.
Length = 157
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 22 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 75
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 76 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 135
>BC001117-1|AAH01117.1| 157|Homo sapiens adaptor-related protein
complex 1, sigma 2 subunit protein.
Length = 157
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 22 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 75
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 76 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 135
>AF251295-1|AAG44595.1| 181|Homo sapiens DC22 protein.
Length = 181
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 45 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 98
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 99 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 158
>AF087876-1|AAP97176.1| 157|Homo sapiens clathrin-associated
protein 19 protein.
Length = 157
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 22 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 75
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 76 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 135
>AB015320-1|BAA33392.1| 157|Homo sapiens sigma1B subunit of AP-1
clathrin adaptor complex protein.
Length = 157
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/120 (20%), Positives = 51/120 (42%)
Frame = +3
Query: 93 LVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASN 272
L ++ ++T+ ++ +LA PK+ + F+E ++ VY+ LY N
Sbjct: 22 LSDKEKKKITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDN 75
Query: 273 ILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
L LE + + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 76 ELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 135
>BX537780-1|CAD97839.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +3
Query: 114 EMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLET 293
++T+ ++ +LA PK+ + F+E ++ VY+ LY N L LE
Sbjct: 5 KITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEI 58
Query: 294 LRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVE 452
+ + ++ +Y + E +++ F DE + G + + V +E
Sbjct: 59 IHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIE 111
>M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth factor
receptor protein.
Length = 1106
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = -3
Query: 670 IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCN 542
+++A+ ++GD++ I+ LP P P ++ + G G P LA+S L+ N
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVN 1053
>J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth factor
receptor protein.
Length = 1106
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = -3
Query: 670 IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCN 542
+++A+ ++GD++ I+ LP P P ++ + G G P LA+S L+ N
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVN 1053
>BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth
factor receptor, beta polypeptide protein.
Length = 1106
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = -3
Query: 670 IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCN 542
+++A+ ++GD++ I+ LP P P ++ + G G P LA+S L+ N
Sbjct: 1008 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVN 1053
>AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ44570 fis, clone UTERU3011063, highly similar
to Transmembrane 9 superfamily protein member 4. ).
Length = 528
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 320 RILCTAHRN*SLEPGLQFAICFRRDCRSWVQRKRQSSAGPF 442
R CTA +L PG+ F ICF +C W K S A PF
Sbjct: 298 RAFCTA----TLYPGVVFGICFVLNCFIW--GKHSSGAVPF 332
>AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth
factor receptor beta precursor variant protein.
Length = 777
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = -3
Query: 670 IFSAID-SDGDDEDIVELPKPLPKDICERG---GWPRLAASNLSRCN 542
+++A+ ++GD++ I+ LP P P ++ + G G P LA+S L+ N
Sbjct: 679 LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEGSPSLASSTLNEVN 724
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,336,736
Number of Sequences: 237096
Number of extensions: 2017477
Number of successful extensions: 4825
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4822
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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