Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0885
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001379-1|AAN71134.1|  550|Drosophila melanogaster GH02702p pro...   298   5e-81
AE014298-1672|AAN09295.1|  550|Drosophila melanogaster CG2446-PE...   298   5e-81
AE014298-1671|AAN09294.1|  550|Drosophila melanogaster CG2446-PD...   298   5e-81
AE014298-1670|AAG22344.1|  550|Drosophila melanogaster CG2446-PC...   298   5e-81
AE014298-1669|AAF48080.1|  550|Drosophila melanogaster CG2446-PB...   298   5e-81
AE014298-1668|AAF48081.1|  550|Drosophila melanogaster CG2446-PA...   298   5e-81
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    31   1.2  
AF217651-4|AAF35310.1|  769|Drosophila melanogaster c12.2 protein.     31   2.0  
AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-P...    31   2.0  
AY070652-1|AAL48123.1|  357|Drosophila melanogaster RH03777p pro...    29   4.7  
AY070651-1|AAL48122.1|  357|Drosophila melanogaster RH03711p pro...    29   4.7  
AE014298-2407|AAF48613.1|  357|Drosophila melanogaster CG9947-PA...    29   4.7  
BT025062-1|ABE73233.1|  532|Drosophila melanogaster IP15640p pro...    29   6.2  

>BT001379-1|AAN71134.1|  550|Drosophila melanogaster GH02702p
           protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-1672|AAN09295.1|  550|Drosophila melanogaster CG2446-PE,
           isoform E protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-1671|AAN09294.1|  550|Drosophila melanogaster CG2446-PD,
           isoform D protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-1670|AAG22344.1|  550|Drosophila melanogaster CG2446-PC,
           isoform C protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-1669|AAF48080.1|  550|Drosophila melanogaster CG2446-PB,
           isoform B protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-1668|AAF48081.1|  550|Drosophila melanogaster CG2446-PA,
           isoform A protein.
          Length = 550

 Score =  298 bits (731), Expect = 5e-81
 Identities = 135/213 (63%), Positives = 165/213 (77%)
 Frame = +2

Query: 68  MATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIK 247
           M+  K T +FF   + K+F+   +LYPQ +KLKAE++ K+P ELI+LD WYQNELPK IK
Sbjct: 1   MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQWYQNELPKLIK 60

Query: 248 SRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAM 427
           +RGKDAHM+++ELVQ MKWKQ+RGKFYPQLSYL+KVNTPRAV+QETKKAFRKLPN+E A+
Sbjct: 61  ARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAI 120

Query: 428 TALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEGSDYTAREYLNFVSHIRNV 607
           TALSNLKGVG            P+ APFMADEC+ AIPE+EG DYT +EYLNFV+HI+  
Sbjct: 121 TALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPEIEGIDYTTKEYLNFVNHIQAT 180

Query: 608 CDRLNEEQNGCGKKWFPHMVELALWTHNIVSDL 706
            +RLN E  G    W PH VELALW+H + +DL
Sbjct: 181 VERLNAEVGGDTPHWSPHRVELALWSHYVANDL 213


>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
           protein.
          Length = 5146

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 414 ILGSLRKAFFVSCITARGVFTFIRYD 337
           +LGSL   F   C+  RG+F F+ YD
Sbjct: 719 VLGSLPNVFSALCLNERGLFEFLSYD 744


>AF217651-4|AAF35310.1|  769|Drosophila melanogaster c12.2 protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +2

Query: 125 DSVLKLYPQAIKLKAERKTKRPDELI-KLD-NWYQNELPKKIKSRGKDAHMIHEELVQLM 298
           D + ++YP    LK ++K KR +EL+ KLD     +   KKI+++ ++  +IH +L +L 
Sbjct: 324 DVISRIYPYQTMLKPDQK-KRVEELLKKLDIQLVPSPSIKKIEAQSQENSLIHIKLDEL- 381

Query: 299 KWKQARGKFYPQLSYLIKVNTPRAVMQETKKAF 397
           +     G+     +Y + +   R  +    +A+
Sbjct: 382 QLNLPEGQIPTASTYFVDLPHQRQALASLLQAY 414


>AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-PA
           protein.
          Length = 1386

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +2

Query: 125 DSVLKLYPQAIKLKAERKTKRPDELI-KLD-NWYQNELPKKIKSRGKDAHMIHEELVQLM 298
           D + ++YP    LK ++K KR +EL+ KLD     +   KKI+++ ++  +IH +L +L 
Sbjct: 324 DVISRIYPYQTMLKPDQK-KRVEELLKKLDIQLVPSPSIKKIEAQSQENSLIHIKLDEL- 381

Query: 299 KWKQARGKFYPQLSYLIKVNTPRAVMQETKKAF 397
           +     G+     +Y + +   R  +    +A+
Sbjct: 382 QLNLPEGQIPTASTYFVDLPHQRQALASLLQAY 414


>AY070652-1|AAL48123.1|  357|Drosophila melanogaster RH03777p
           protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 144 ILRRLN*KLNVKQKDQMSS*NWTIGIKMNFPRRSNRGVKMRT*STKNLXXXXN 302
           + RRLN + N    + + S N+T+ IK N+P  S  G K    ST ++    N
Sbjct: 261 LYRRLN-QTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKN 312


>AY070651-1|AAL48122.1|  357|Drosophila melanogaster RH03711p
           protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 144 ILRRLN*KLNVKQKDQMSS*NWTIGIKMNFPRRSNRGVKMRT*STKNLXXXXN 302
           + RRLN + N    + + S N+T+ IK N+P  S  G K    ST ++    N
Sbjct: 261 LYRRLN-QTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKN 312


>AE014298-2407|AAF48613.1|  357|Drosophila melanogaster CG9947-PA
           protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 144 ILRRLN*KLNVKQKDQMSS*NWTIGIKMNFPRRSNRGVKMRT*STKNLXXXXN 302
           + RRLN + N    + + S N+T+ IK N+P  S  G K    ST ++    N
Sbjct: 261 LYRRLN-QTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKN 312


>BT025062-1|ABE73233.1|  532|Drosophila melanogaster IP15640p
           protein.
          Length = 532

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 337 QLRVEFSSGLFPFHELDKFFVDHVRIFTPRFDLLGKFILIPIVQF 203
           Q  +EF  G++ F ++ +  V HV+I +P F L     +I ++ F
Sbjct: 153 QQNMEFLRGVYAFMQVSRSSVSHVKIDSPVFRLHTNATVILLITF 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,222,239
Number of Sequences: 53049
Number of extensions: 712433
Number of successful extensions: 2164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)