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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0885
         (710 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g12210.2 68416.m01524 expressed protein                             98   6e-21
At3g12210.1 68416.m01523 expressed protein                             85   6e-17
At1g61980.1 68414.m06991 mitochondrial transcription termination...    32   0.33 
At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family p...    31   0.57 
At5g20420.1 68418.m02428 SNF2 domain-containing protein / helica...    31   0.75 
At5g26020.1 68418.m03096 hypothetical protein                          30   1.3  
At3g56100.1 68416.m06235 leucine-rich repeat transmembrane prote...    30   1.3  
At1g61960.1 68414.m06989 mitochondrial transcription termination...    30   1.7  
At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi do...    29   2.3  
At1g61990.1 68414.m06992 mitochondrial transcription termination...    29   3.0  
At1g62110.1 68414.m07008 mitochondrial transcription termination...    29   4.0  
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t...    28   7.0  
At1g62150.1 68414.m07011 mitochondrial transcription termination...    28   7.0  
At4g32820.1 68417.m04668 expressed protein ; expression supporte...    27   9.3  
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ...    27   9.3  
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc...    27   9.3  
At1g62085.1 68414.m07006 mitochondrial transcription termination...    27   9.3  
At1g61970.1 68414.m06990 mitochondrial transcription termination...    27   9.3  
At1g10600.1 68414.m01200 mov34 family protein similar to AMSH [H...    27   9.3  

>At3g12210.2 68416.m01524 expressed protein
          Length = 209

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 55/164 (33%), Positives = 88/164 (53%)
 Frame = +2

Query: 194 ELIKLDNWYQNELPKKIKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAV 373
           EL+ LD +Y+ +LP  +  R  + ++   EL QLMKWK +RGK+ P+L   +       V
Sbjct: 31  ELVSLDQFYRIKLPCLLHDRDPNPYLTTSELSQLMKWKLSRGKWRPRLLDFVSSLDDSVV 90

Query: 374 MQETKKAFRKLPNIESAMTALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEMEG 553
              ++KAF+ LP+I  A+  L+ LKGVG            P+IAPFM+DE ++ +     
Sbjct: 91  KSASEKAFKSLPDISKAVKELTVLKGVGAATASAVLAAYAPDIAPFMSDEAME-VALGNS 149

Query: 554 SDYTAREYLNFVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWT 685
            DY+ ++YL F + +++    L  +    G    P  +E ALW+
Sbjct: 150 KDYSLKQYLLFATKLQDKAKELKLKGEWDG----PSDIERALWS 189


>At3g12210.1 68416.m01523 expressed protein
          Length = 155

 Score = 84.6 bits (200), Expect = 6e-17
 Identities = 43/110 (39%), Positives = 63/110 (57%)
 Frame = +2

Query: 194 ELIKLDNWYQNELPKKIKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAV 373
           EL+ LD +Y+ +LP  +  R  + ++   EL QLMKWK +RGK+ P+L   +       V
Sbjct: 31  ELVSLDQFYRIKLPCLLHDRDPNPYLTTSELSQLMKWKLSRGKWRPRLLDFVSSLDDSVV 90

Query: 374 MQETKKAFRKLPNIESAMTALSNLKGVGXXXXXXXXXXXXPEIAPFMADE 523
              ++KAF+ LP+I  A+  L+ LKGVG            P+IAPFM+DE
Sbjct: 91  KSASEKAFKSLPDISKAVKELTVLKGVGAATASAVLAAYAPDIAPFMSDE 140


>At1g61980.1 68414.m06991 mitochondrial transcription termination
           factor-related / mTERF-related contains Pfam profile
           PF02536: mTERF
          Length = 418

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 119 EFDSVLKLYPQAIKLKAERKTKRPDELIKLDNW 217
           EF  ++K +PQ I L AE   K+ + L+K  NW
Sbjct: 308 EFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNW 340


>At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family
           protein weak similarity to SP|Q00765 Polyposis locus
           protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
           profile PF03134: TB2/DP1, HVA22 family
          Length = 166

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 218 YQNELPK---KIKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETK 388
           ++NE+ +   K+K+R KD  MI+ +        Q + KF+  L Y+ + +TP++  +E K
Sbjct: 90  HENEIDRNLVKVKTRAKDMAMIYLQKAI----NQGQTKFFEILQYITEQSTPKSKAEEKK 145

Query: 389 K 391
           +
Sbjct: 146 E 146


>At5g20420.1 68418.m02428 SNF2 domain-containing protein / helicase
           domain-containing protein low similarity to SP|Q9U7E0
           Transcriptional regulator ATRX homolog {Caenorhabditis
           elegans}; contains PFam profiles PF00271: Helicase
           conserved C-terminal domain, PF00176: SNF2 family
           N-terminal domain
          Length = 1261

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
 Frame = +2

Query: 278 EELVQLMKWKQARGKFYPQLSYLIKVNTPRAVM-----QETKKAFRKLPNIESAMTALSN 442
           E+   LMK + + GKF P LS+L   +T ++++      +TK  ++ + + E + + LS+
Sbjct: 169 EDCTSLMKTRLSLGKFLPDLSWLTVTSTLKSIVFQIRTVQTKMVYQIVTDEEGSSSTLSS 228

Query: 443 L 445
           +
Sbjct: 229 M 229


>At5g26020.1 68418.m03096 hypothetical protein
          Length = 241

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 379 RDEKGLPQTAQYRIRDDRSKQSQRRGNGHSIS 474
           RDE G P T + ++ +  + ++QRRG G   S
Sbjct: 106 RDETGTPMTQRKKVCEPEASKTQRRGKGDEAS 137


>At3g56100.1 68416.m06235 leucine-rich repeat transmembrane protein
           kinase, putative hypothetical proteins - Arabidopsis
           thaliana
          Length = 719

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +2

Query: 152 AIKLKAER--KTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELVQLMKWKQARGKF 325
           A+K   ER  K K+ ++L+  D   +  L   + +RG D H+     + L+K   ARG F
Sbjct: 477 AVKRLRERSPKVKKREKLVVFDYMSRGSLATFLHARGPDVHINWPTRMSLIK-GMARGLF 535

Query: 326 Y 328
           Y
Sbjct: 536 Y 536


>At1g61960.1 68414.m06989 mitochondrial transcription termination
           factor-related / mTERF-related contains Pfam profile
           PF02536: mTERF
          Length = 457

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 EFDSVLKLYPQAIKLKAERKTKRPDELIKLDNW 217
           EF  ++K YPQ I   AE   K+ + ++K  NW
Sbjct: 344 EFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNW 376


>At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi
           domain-containing protein similar to SP|Q9XGW1 PINHEAD
           protein (ZWILLE protein) {Arabidopsis thaliana};
           contains Pfam profiles PF02171: Piwi domain, PF02170:
           PAZ domain
          Length = 990

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +2

Query: 38  TQCCTFRTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDE 196
           TQCC +   T  +++  S   L+ NAK   S+ +LY  +I     R   RPDE
Sbjct: 676 TQCCLYPNITKLSSQFVSNLALKINAKIGGSMTELY-NSIPSHIPR-LLRPDE 726


>At1g61990.1 68414.m06992 mitochondrial transcription termination
           factor-related / mTERF-related contains Pfam profile
           PF02536: mTERF
          Length = 414

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 80  KDTSTFF-LEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNEL 232
           K   TF  L  +  EF  ++K YP  I+   E   K+ + L+K   W +N L
Sbjct: 287 KSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNAL 338


>At1g62110.1 68414.m07008 mitochondrial transcription termination
           factor family protein / mTERF family protein contains
           Pfam profile PF02536: mTERF
          Length = 462

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 119 EFDSVLKLYPQAIKLKAERKTKRPDELIKLDNW 217
           EF +++K +PQ + L AE   K+ + ++K  NW
Sbjct: 345 EFITMVKRFPQCLILSAETVKKKIEFVVKKMNW 377


>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
           enhancer of zeste-like protein 1(EZA1) (GI:4185507)
           [Arabidopsis thaliana]; similar to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 856

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 124 EFFCICLQKESRRVFRGSHCERSKC 50
           E +C C  K  +  FRG HC +S+C
Sbjct: 631 EKYCGC-SKSCKNRFRGCHCAKSQC 654


>At1g62150.1 68414.m07011 mitochondrial transcription termination
           factor-related / mTERF-related contains Pfam profile
           PF02536: mTERF
          Length = 463

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +2

Query: 20  AVVKLNTQCCTFRTFTMATAKDTSTFF-LEANAKEFDSVLKLYPQAIKLKAERKTKRPDE 196
           +V K N  C   R           TF  L  +  EF  ++K  PQ I   AE   K+ + 
Sbjct: 319 SVFKKNPLC--LRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEF 376

Query: 197 LIKLDNW 217
           ++K  NW
Sbjct: 377 VVKKMNW 383


>At4g32820.1 68417.m04668 expressed protein ; expression supported
           by MPSS
          Length = 1817

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 80  KDTSTFFLEANAKEFDSVLKLYPQAIKLKAE 172
           K+ +T FLE  +  +++ L  Y QAI L A+
Sbjct: 85  KNLATVFLELGSSHYENALNCYLQAIDLDAK 115


>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
            transcription factor jumonji (jmj) family protein
            contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
            domain and PF00096: Zinc finger, C2H2 type
          Length = 1354

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 518  DECVQAIPEMEGSDYTAREYLNFVSHIRNVCDRLNEEQNGCGKKWFPH 661
            +EC      MEG   +       + H RN+C        GCGK +F H
Sbjct: 1232 EECAAYQCNMEGCTMSFSSEKQLMLHKRNIC-----PIKGCGKNFFSH 1274


>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
           polycomb-group protein identical to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 902

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 124 EFFCICLQKESRRVFRGSHCERSKC 50
           E +C C  K  +  FRG HC +S+C
Sbjct: 675 EKYCGC-PKSCKNRFRGCHCAKSQC 698


>At1g62085.1 68414.m07006 mitochondrial transcription termination
           factor family protein / mTERF family protein contains
           Pfam profile PF02536: mTERF
          Length = 461

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 119 EFDSVLKLYPQAIKLKAERKTKRPDELIKLDNW 217
           E   + K +PQ + L AE   K+ + L+K  NW
Sbjct: 348 EVAMIAKRFPQCLILSAETVKKKTEFLVKKMNW 380


>At1g61970.1 68414.m06990 mitochondrial transcription termination
           factor-related / mTERF-related contains Pfam profile
           PF02536: mTERF
          Length = 418

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 119 EFDSVLKLYPQAIKLKAERKTKRPDELIKLDNW 217
           EF  ++K +P  I L  E   K+ + L+K  NW
Sbjct: 308 EFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNW 340


>At1g10600.1 68414.m01200 mov34 family protein similar to AMSH [Homo
           sapiens] GI:4098124; contains Pfam profile PF01398:
           Mov34/MPN/PAD-1 family
          Length = 271

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 686 ASRGPALPCVETISCRSRFVPRL 618
           +S  P+L CVE ++C+S  V R+
Sbjct: 5   SSPSPSLSCVENVTCKSSHVSRV 27


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,187,462
Number of Sequences: 28952
Number of extensions: 347012
Number of successful extensions: 932
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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