BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0884 (711 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0483 - 8804021-8804485 47 1e-05 03_02_0484 + 8805053-8805538 47 2e-05 03_02_0478 + 8775892-8776377 46 2e-05 03_02_0485 - 8808139-8808618 45 5e-05 01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 45 7e-05 01_01_0229 - 1943473-1943922 45 7e-05 01_01_0231 + 1951047-1951499 44 1e-04 01_01_0227 + 1933247-1933699 41 8e-04 02_02_0077 - 6586638-6587165 39 0.003 03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 39 0.005 02_01_0222 + 1450233-1450766 37 0.018 11_02_0041 - 7669692-7670312 33 0.22 06_01_1017 - 7951985-7952425 33 0.30 03_05_0543 - 25404630-25405408,25405461-25405605 32 0.39 02_01_0760 - 5639315-5639685,5640072-5640360 31 0.90 09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 31 1.2 11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720... 30 1.6 05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 30 1.6 12_02_1174 - 26696869-26698191 30 2.1 03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 30 2.1 06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 2.8 05_07_0296 - 29061900-29061923,29062026-29062440,29062529-290625... 29 2.8 12_01_0946 + 9376037-9376318 28 8.4 08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.4 05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 28 8.4 >03_02_0483 - 8804021-8804485 Length = 154 Score = 47.2 bits (107), Expect = 1e-05 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Frame = +2 Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427 DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+ Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122 Query: 428 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 +++ + +GVLTV P+ + +++ IT Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153 >03_02_0484 + 8805053-8805538 Length = 161 Score = 46.8 bits (106), Expect = 2e-05 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Frame = +2 Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427 DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+ Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129 Query: 428 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 +++ + +GVLTV P+ + +++ +T Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160 >03_02_0478 + 8775892-8776377 Length = 161 Score = 46.4 bits (105), Expect = 2e-05 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Frame = +2 Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427 DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+ Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129 Query: 428 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 +++ + +GVLTV P+ A + +++ I+ Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160 >03_02_0485 - 8808139-8808618 Length = 159 Score = 45.2 bits (102), Expect = 5e-05 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Frame = +2 Query: 272 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 427 DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+ Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127 Query: 428 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 +++ + +GVLTV P+ + +++ I+ Sbjct: 128 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIS 158 >01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 Length = 438 Score = 44.8 bits (101), Expect = 7e-05 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Frame = +2 Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370 A AN + T F+ D+ EE+ V+ +G V+V + E++ D+ Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96 Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 + R QF RR+ LPEN D V++ L +GVLTV P+ +A+ I+ Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149 >01_01_0229 - 1943473-1943922 Length = 149 Score = 44.8 bits (101), Expect = 7e-05 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Frame = +2 Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370 A AN V T F+ D+ EE+ V+ +G V+V + E++ D+ Sbjct: 38 AFANARVDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95 Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 + R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+ Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148 >01_01_0231 + 1951047-1951499 Length = 150 Score = 44.0 bits (99), Expect = 1e-04 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Frame = +2 Query: 206 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 370 A AN + T F+ D+ EE+ V+ +G V+V + E++ D+ Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96 Query: 371 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 523 + R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+ Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149 >01_01_0227 + 1933247-1933699 Length = 150 Score = 41.1 bits (92), Expect = 8e-04 Identities = 22/64 (34%), Positives = 34/64 (53%) Frame = +2 Query: 332 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 511 V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145 Query: 512 VPIT 523 +PI+ Sbjct: 146 IPIS 149 >02_02_0077 - 6586638-6587165 Length = 175 Score = 39.1 bits (87), Expect = 0.003 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 14/147 (9%) Frame = +2 Query: 134 PDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKT 313 PD+L + PT R Y R + MA DV S + +D+ +P ++ V+ Sbjct: 25 PDELERQLNPPT--RAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEV 80 Query: 314 ADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALPENCNPDTVESRLSSD 454 DG V+ R D+ G Y+ + F RR+ LPE+ + D V + D Sbjct: 81 EDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEY-KD 139 Query: 455 GVLTV-IAPRTPAATKNERAVPITQTG 532 GVLTV + + P K R V + G Sbjct: 140 GVLTVTVDKKPPPEPKKPRVVEVKVAG 166 >03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 Length = 327 Score = 38.7 bits (86), Expect = 0.005 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Frame = +2 Query: 191 PWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE-- 364 P + +A + + + + ++ D+ S EE+ V D +++ G+H++ + E Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181 Query: 365 ----HGYISRQ----FTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATK 499 G+ + + R ALP+ C+ V + L +GVL V P+T K Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233 >02_01_0222 + 1450233-1450766 Length = 177 Score = 36.7 bits (81), Expect = 0.018 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Frame = +2 Query: 293 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESRLS 448 EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152 Query: 449 SDGVLTVIAPRTPAATKNERAVPIT 523 + GVLT+ P+ + R +PIT Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176 >11_02_0041 - 7669692-7670312 Length = 206 Score = 33.1 bits (72), Expect = 0.22 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 383 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 532 +F RR+ +P + V +RL DGVLTV P+ P E R V I G Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190 >06_01_1017 - 7951985-7952425 Length = 146 Score = 32.7 bits (71), Expect = 0.30 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +2 Query: 299 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 466 ++V+ A + E + E +D +++ +F R ALP + + + + + GVLT Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123 Query: 467 VIAPRTPAATKNERAVPI 520 V+ P+ PA + R PI Sbjct: 124 VVVPKEPAPAR-PRTRPI 140 >03_05_0543 - 25404630-25405408,25405461-25405605 Length = 307 Score = 32.3 bits (70), Expect = 0.39 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 4/109 (3%) Frame = +2 Query: 251 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 427 + ++LD F EEI V + G++ G ER SR F + + LP +CN D Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94 Query: 428 TVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT--QTGPVRKEIKEPTA 565 + ++ ++ + + +TP+ T + P+T P + E + P A Sbjct: 95 GIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPRRPPA 143 >02_01_0760 - 5639315-5639685,5640072-5640360 Length = 219 Score = 31.1 bits (67), Expect = 0.90 Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 8/109 (7%) Frame = +2 Query: 218 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 373 R + + +++++++ +V +++ V DG + + G+ E+R +D G + Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170 Query: 374 ISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 520 + + LPE+ + + + + DGVL V PR+P ++ V + Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSPERKRSVTEVKV 218 >09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094, 9893330-9893557,9894095-9894261,9894312-9894395, 9894614-9894820,9894919-9895251,9895371-9895513, 9895607-9895723,9895824-9895980,9896054-9896157, 9896272-9896432,9896518-9896707,9896732-9896834, 9896950-9897231,9897327-9897649,9897750-9897786, 9898109-9898162,9898292-9898368,9898449-9898502, 9898738-9898822,9900289-9900426,9900592-9900603 Length = 1150 Score = 30.7 bits (66), Expect = 1.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 571 SFRSGLLNLLPDRAGLSDGNSSLVLRGSRSPGSDHGQHTVRGQPR 437 SFR G+L L +G VL G ++ G HG TV G P+ Sbjct: 700 SFRPGVLTALMGISGAGKTTLLDVLAGRKTSGHIHGNITVSGYPK 744 >11_05_0004 - 18269416-18269473,18270319-18270509,18271061-18272004, 18272083-18272254,18272332-18272407,18272498-18272617, 18272795-18272959,18273048-18273138,18273673-18273757, 18273873-18274043,18274151-18274207,18274290-18274385, 18275223-18275365,18275464-18275530 Length = 811 Score = 30.3 bits (65), Expect = 1.6 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 6/153 (3%) Frame = +2 Query: 152 AVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQ-HFSPEEISVKTADGYV 328 AV T TM YY+P A + S K + + + + F EE + G + Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 337 Query: 329 IVEGKHEER---QDEHGYISRQFTRRYALP--ENCNPDTVESRLSSDGVLTVIAPRTPAA 493 + G + + + + ++ ++P E +P +E +S V + PRT Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 397 Query: 494 TKNERAVPITQTGPVRKEIKEPTAEAESNETKQ 592 N A+P + ++ + E+E N T++ Sbjct: 398 RPNATALPADSSAIAKEAATKVVVESEPNGTQR 430 >05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928, 5520929-5521223,5521531-5521674,5521756-5521890, 5522004-5522093,5523702-5523809,5523905-5523986, 5525362-5525417,5525888-5525986,5526090-5526394, 5526898-5527075,5527167-5527280,5527376-5527507, 5527614-5527718 Length = 742 Score = 30.3 bits (65), Expect = 1.6 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = +2 Query: 359 DEHGYISRQFTRRYA-LPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGP 535 D+ + + FTR Y+ N RL + ++ P + K++ V T P Sbjct: 323 DDISTVCKWFTREYSDTTYGKNAQLAAKRLKATQPIST-QPDKEESNKDDLFVEPIYTIP 381 Query: 536 VRKEIKEPTAEAESNETK 589 +KE +PT + ESN T+ Sbjct: 382 AKKEEVQPTKDLESNSTE 399 >12_02_1174 - 26696869-26698191 Length = 440 Score = 29.9 bits (64), Expect = 2.1 Identities = 25/101 (24%), Positives = 42/101 (41%) Frame = +2 Query: 263 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 442 V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84 Query: 443 LSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTA 565 D L + P A AV + ++ E K P A Sbjct: 85 F-DDHKLIITLPLVAA------AVDVDESSATSPEFKTPPA 118 >03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417, 1732528-1732573,1732687-1732785,1734363-1734431, 1735706-1736036,1736123-1736256,1736400-1737251 Length = 722 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = -2 Query: 689 TIKRSVSQARTRNANKINTRYNTFLIHSVP 600 TI++ ++ RTRNAN I TR + FL H+ P Sbjct: 351 TIRKRLTGDRTRNAN-ITTRDSPFLQHNTP 379 >06_03_1490 + 30497980-30498102,30499034-30500156,30500914-30501132, 30501228-30501454,30501810-30501884,30502250-30502321, 30502765-30502863,30502975-30503046,30503131-30503245, 30503455-30503523,30503625-30503952,30504320-30504437, 30504522-30505448 Length = 1188 Score = 29.5 bits (63), Expect = 2.8 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +3 Query: 84 DTNRTAFAIRTSDWRLLRTIS*RPSSRQRCPEITTVRGSRWRSPIETSVPPSPRIRINS 260 D NRT F R + LR ++ S R+ P+I VR + + P + P+PRI +++ Sbjct: 47 DKNRTGFLGREDFYNALRLVTVAQSGRELTPDI--VRSALY-GPAAAKI-PAPRINVST 101 >05_07_0296 - 29061900-29061923,29062026-29062440,29062529-29062566, 29062689-29062741,29062851-29063034,29064486-29064669, 29064761-29064916,29064998-29065173,29065277-29065454, 29066015-29066421 Length = 604 Score = 29.5 bits (63), Expect = 2.8 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Frame = +2 Query: 308 KTADGYVIVEGKHEERQDEHGYISRQFTRRYALPE------NCNPDTVESRLSSDGV-LT 466 +TA GY+ + E R+D H + TR+ + + C P T+++ + G+ + Sbjct: 343 RTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQADAYTTGLSMK 402 Query: 467 VIAPRTPAATKNERAVPITQTGPVRKEIKE 556 I R N+ VP T+ + KE KE Sbjct: 403 EIERRRKIGAANKGKVPWTKGRKLSKEHKE 432 >12_01_0946 + 9376037-9376318 Length = 93 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = +2 Query: 155 VITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGY 325 ++T T S RPWK N D T T + + + +++ +P +I + GY Sbjct: 2 IVTTTSSTTTTRPWKTPTRENHDNQHTPTRSHN---IQANIRQDTPPDIDFRDRHGY 55 >08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560, 4683834-4684204,4684290-4684835,4684927-4685027, 4685117-4685933,4686025-4686213,4686313-4686384, 4686477-4686587,4686647-4686652,4686694-4686794, 4687714-4687813,4687891-4687986,4688157-4688273, 4688367-4688492,4688566-4688619,4688745-4688992, 4689087-4689195,4689284-4689583,4689799-4689963 Length = 2240 Score = 27.9 bits (59), Expect = 8.4 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Frame = +1 Query: 37 RMLK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 183 R++K + I P + PPSRS R+ + G S +HH +D Q L Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866 >05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821, 7270913-7271155,7271227-7271481,7272017-7272370, 7273082-7273164,7273250-7273630,7273874-7274027 Length = 820 Score = 27.9 bits (59), Expect = 8.4 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = +1 Query: 88 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEADGD 210 P + G R A P+G A D + L+ E+DG+ Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,212,502 Number of Sequences: 37544 Number of extensions: 381605 Number of successful extensions: 1396 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1395 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1839213168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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