Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0882
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.11 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = -3

Query: 246 QFINSASHFINSIYDLIRHTLKFILHVL*K*LYVLCYFLHIFWIAGWC*VFIFCVFNNIV 67
           +F     +FI +IY L   T    LHV     Y+   F HIF+    C  FI  +  NIV
Sbjct: 36  KFCRILKYFIIAIYVLTILTSSVTLHVCFN-SYMYA-FTHIFFFFAICCDFIALIVVNIV 93

Query: 66  RV 61
            V
Sbjct: 94  HV 95



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 352 VWINNKYK*FCRYLKLF 402
           ++   KY+ FCR LK F
Sbjct: 28  IYHKEKYRKFCRILKYF 44


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 17  FTLEYILFSLIWQNRTLTILLKTQKMNTQHQPAI 118
           FT+ YILF+L     T+ +++    ++++ Q  +
Sbjct: 256 FTISYILFALFNTFGTILLIMTCSGVHSESQKLV 289


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 655 ITVIIKLNLR-LLVEGWKVTRLLKI 584
           +T I+  + R  L+EGWKV ++ +I
Sbjct: 459 LTAIVIFSERPALIEGWKVEKIQEI 483


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -2

Query: 217 QFYL*FDQTYFEIYLACFVE----VIVRIVLLPAYFLDRWLVLSIHF 89
           +FY  F   YF++Y+  FV     V+V+++L+    L + L   + F
Sbjct: 143 EFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRF 189


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -2

Query: 217 QFYL*FDQTYFEIYLACFVE----VIVRIVLLPAYFLDRWLVLSIHF 89
           +FY  F   YF++Y+  FV     V+V+++L+    L + L   + F
Sbjct: 143 EFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRF 189


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 153 LYVLCYFLHIFWI 115
           ++V CYF+++F +
Sbjct: 144 VFVFCYFIYLFTV 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,263
Number of Sequences: 336
Number of extensions: 3684
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)