Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0882
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48648| Best HMM Match : HSBP1 (HMM E-Value=1.5e-16) 70 2e-12
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 0.66
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 31 1.1
SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 30 1.5
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 30 1.5
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 30 2.0
SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2) 29 4.6
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 29 4.6
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 28 6.1
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 28 8.1
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 8.1
SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 8.1
SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 8.1
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 28 8.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_48648| Best HMM Match : HSBP1 (HMM E-Value=1.5e-16)
Length = 76
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/57 (47%), Positives = 45/57 (78%)
Frame = +1
Query: 115 DPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGV 285
+PK++ ++ Q+V+ LQNMQDKFQ+ D I+ RI++ G R+D++EK++TDLM +G+
Sbjct: 4 NPKSVADLIQFVEGTLQNMQDKFQTAEDSIVKRINDTGKRLDDIEKSLTDLMDHSGI 60
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 121 KNMQEVTQYVQSLLQNMQDKFQSMSDQI---INRIDEMGSRVDELEKNITD 264
KN+QEV++ L MQ++ Q+ S Q+ + +++E+ S + L+++++D
Sbjct: 901 KNLQEVSENKTKQLSKMQEELQTTSVQLRDALAKVEELKSNKELLQQSLSD 951
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 594 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 641
>SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 204 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 251
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 271 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 318
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 652 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 699
>SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 261 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 308
>SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 204 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 251
>SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 186 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 233
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 600 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 647
>SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 246
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 228 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 275
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 46 NMAEPNSDNIVKNTENEYSTPASDPKNMQ-EVTQYVQSLLQNMQD 177
N E S+N KN N+ STP D K+ Q ++ +++ SL + ++D
Sbjct: 55 NYNEARSENCEKNNNNDSSTP--DAKSQQADIKEWIVSLEKQLKD 97
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 61 NSDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVD 240
N+ V + EN+ ++ K +++ ++ + N+++ ++ +DQ+ ++ S++
Sbjct: 1826 NAKREVVDRENQIQWHKNNEKQLEDEISVLKQKISNLRESNENYADQVA----KLNSQIQ 1881
Query: 241 ELEKNITDL---MTQAGVENEK 297
E E I DL M ENEK
Sbjct: 1882 ERESRIADLEHFMNLLRDENEK 1903
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 118 PKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENEK 297
P ++E+ +YVQS L+ R E + +ELE+ + D+ + G +K
Sbjct: 613 PSTLRELEKYVQSCLRKKHKTPAKKPKNAEEREQEQARKKEELERRLQDVSGKLGAPAQK 672
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 150 YVLCYFLHIFWIAGW---C*VFIFCVFNNIVRV 61
Y LC+FL WI GW ++IF VF + +
Sbjct: 634 YYLCWFLQALWIFGWSAAASIWIFWVFLKFIDI 666
>SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 MQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVE 288
M+ F+SM QI NR+D++ +V L+ ++ TQ+ VE
Sbjct: 189 MRSVFESMVSQISNRVDDLVEKVSGLKASLE--FTQSDVE 226
>SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2)
Length = 760
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 160 LQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENE 294
LQ D + D+I + SR+ +LEK + +L +Q VE+E
Sbjct: 59 LQTRLDAELNARDKISQSSQTVQSRITQLEKQVAELHSQLKVESE 103
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/77 (22%), Positives = 39/77 (50%)
Frame = +1
Query: 22 VGIYFIFFNMAEPNSDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ 201
VG F+ + S+ V E + + ++++EV + + L Q +D+F + ++
Sbjct: 197 VGTLFLTGTLTFSVSELEVYRVVKESAPHVKEDQSLKEVAKEDEPLNQVTKDEFVTKMEK 256
Query: 202 IINRIDEMGSRVDELEK 252
+ + DEM +++E E+
Sbjct: 257 LRAKKDEMLKKIEEFEE 273
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/56 (17%), Positives = 33/56 (58%)
Frame = +1
Query: 109 ASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQ 276
+ DP ++ + +Q + ++++ ++++++ R+D++ +V L+K +LM +
Sbjct: 476 SKDPGLSEDESHVIQKEADDCEERWDTLNEKVSGRVDDVVHKVLLLQKKEKELMDE 531
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 199 QIINRIDEMGSRVDELEKNITDLMTQAGVENE 294
++ + +D R+ ELE+ I DLM + G E
Sbjct: 1717 EVEHELDRAKKRIQELEEEIRDLMLKLGTSRE 1748
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 49 MAEPNSDNIVKNTENEYST-PASDPKNMQEVTQY-VQSLL----QNMQDKFQSMSDQIIN 210
M+ +S KN + S P + ++ + VT V++LL M+ F+SM QI +
Sbjct: 1 MSRKSSKKAAKNRTDSLSPGPTTIVEDEEFVTMAAVKNLLAVQESMMRSVFESMVSQISS 60
Query: 211 RIDEMGSRVDELEKNITDLMTQAGVE 288
R+D++ +V L+ ++ TQ+ VE
Sbjct: 61 RVDDLVEKVSGLKASLE--FTQSEVE 84
>SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 49 MAEPNSDNIVKNTENEYST-PASDPKNMQEVTQY-VQSLL----QNMQDKFQSMSDQIIN 210
M+ +S KN + S P + ++ + VT V++LL M+ F+SM QI +
Sbjct: 1 MSRKSSKKAAKNRTDSLSPGPTTIVEDEELVTMAAVKNLLAVQESMMRSVFESMVSQISS 60
Query: 211 RIDEMGSRVDELEKNITDLMTQAGVE 288
R+D++ +V L+ ++ TQ+ VE
Sbjct: 61 RVDDLVEKVSGLKASLE--FTQSEVE 84
>SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 49 MAEPNSDNIVKNTENEYST-PASDPKNMQEVTQY-VQSLL----QNMQDKFQSMSDQIIN 210
M+ +S KN + S P + ++ + VT V++LL M+ F+SM QI +
Sbjct: 1 MSRKSSKKAAKNRTDSLSPGPTTIVEDEELVTMAAVKNLLAVQESMMRSVFESMVSQISS 60
Query: 211 RIDEMGSRVDELEKNITDLMTQAGVE 288
R+D++ +V L+ ++ TQ+ VE
Sbjct: 61 RVDDLVEKVSGLKASLE--FTQSEVE 84
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 49 MAEPNSDNIVKNTENEYST-PASDPKNMQEVTQY-VQSLL----QNMQDKFQSMSDQIIN 210
M+ +S KN + S P + ++ + VT V++LL M+ F+SM QI +
Sbjct: 1 MSRKSSKKAAKNRTDSLSPGPTTIVEDEEFVTMAAVKNLLAVQESMMRSVFESMVSQISS 60
Query: 211 RIDEMGSRVDELEKNITDLMTQAGVE 288
R+D++ +V L+ ++ TQ+ VE
Sbjct: 61 RVDDLVEKVSGLKASLE--FTQSEVE 84
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +1
Query: 76 VKNTENEYSTPASDPKNMQEVTQ---YVQSLLQNMQDKFQSMSDQI---INRIDEMGSRV 237
VK +E T + K ++E + ++ +L M+DK + + D I +N D+ +
Sbjct: 2697 VKAANSEKKTIEDEVKKLRETVEDKEELEEILGEMRDKRKRLHDDIEKALNERDDFEDEL 2756
Query: 238 DELEKNI 258
EL+KN+
Sbjct: 2757 LELKKNV 2763
>SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 138 YFLHIFWIAGWC*VFIFCVFNNIVRVRFCHI 46
Y L + + G CVF +VRV FC+I
Sbjct: 660 YMLDVMAVLGLALAIAMCVFAALVRVVFCYI 690
>SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 49 MAEPNSDNIVKNTENEYST-PASDPKNMQEVTQY-VQSLL----QNMQDKFQSMSDQIIN 210
M+ +S KN + S P + ++ + VT V++LL M+ F+SM QI +
Sbjct: 1 MSRKSSKKAAKNRTDSLSPGPTTIVEDEELVTMAAVKNLLAVQESMMRSVFESMVSQISS 60
Query: 211 RIDEMGSRVDELEKNITDLMTQAGVE 288
R+D++ +V L+ ++ TQ+ VE
Sbjct: 61 RVDDLVEKVSGLKASLE--FTQSEVE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,568,009
Number of Sequences: 59808
Number of extensions: 372360
Number of successful extensions: 1180
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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