Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0882
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase... 31 0.58
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase... 31 0.58
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 30 1.3
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 1.3
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 30 1.8
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 30 1.8
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 29 3.1
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006774-5|AAF60618.1| 363|Caenorhabditis elegans Hypothetical ... 29 3.1
AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical... 28 5.4
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC006708-1|AAL77186.1| 129|Caenorhabditis elegans Hypothetical ... 28 7.1
U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine rece... 27 9.4
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical
protein K08E7.2 protein.
Length = 80
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +1
Query: 79 KNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNI 258
K+T A NM ++T +Q +LQ QD+FQ MSDQII RID+M +R+D+LEKNI
Sbjct: 5 KSTTPTAQLDAPADGNMNDLTSLIQGVLQQTQDRFQHMSDQIIRRIDDMTTRIDDLEKNI 64
Query: 259 TDLMTQAGVEN 291
DL+ VE+
Sbjct: 65 NDLLQSNQVEH 75
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 79 KNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNI 258
+N+E S + D +M+ T Y+ + + + S IINR DE+ S +DE E +
Sbjct: 447 QNSEEAMSLKSLDSDSMRPTTFYIPNSAVSTTNPTTPTS-AIINRFDEVLSPIDEREGSE 505
Query: 259 TDLM 270
+DL+
Sbjct: 506 SDLV 509
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 79 KNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNI 258
+N+E S + D +M+ T Y+ + + + S IINR DE+ S +DE E +
Sbjct: 447 QNSEEAMSLKSLDSDSMRPTTFYIPNSAVSTTNPTTPTS-AIINRFDEVLSPIDEREGSE 505
Query: 259 TDLM 270
+DL+
Sbjct: 506 SDLV 509
>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
like protein 1,isoform a protein.
Length = 1075
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 73 IVKNTENEYS---TPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDE 243
I+ + E+ Y T + P +Q +++L+ + S SDQ++++I++ R+ E
Sbjct: 927 IIDSDEHGYPAIVTMGTLPDQLQRSFNKLKNLIAHCVTTL-SQSDQLLSKIEDSIRRISE 985
Query: 244 LEKNITDLMTQAGVENEK 297
+ ++ L +AG++ +K
Sbjct: 986 CHEELSKLCAEAGLKGQK 1003
>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
like protein 1,isoform b protein.
Length = 1068
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 73 IVKNTENEYS---TPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDE 243
I+ + E+ Y T + P +Q +++L+ + S SDQ++++I++ R+ E
Sbjct: 920 IIDSDEHGYPAIVTMGTLPDQLQRSFNKLKNLIAHCVTTL-SQSDQLLSKIEDSIRRISE 978
Query: 244 LEKNITDLMTQAGVENEK 297
+ ++ L +AG++ +K
Sbjct: 979 CHEELSKLCAEAGLKGQK 996
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 55 EPNSDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSR 234
E N++N+V + EY ++ K +QE + + +++K ++I +D+ +
Sbjct: 223 EENNENLV--LQAEYEQKLAEYKALQEKRSQFEEQNRELENKLSKYKPELIEALDDPEAY 280
Query: 235 VDELEKNITDLMTQ 276
V +L I +L Q
Sbjct: 281 VQKLMGKIAELNKQ 294
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 55 EPNSDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSR 234
E N++N+V + EY ++ K +QE + + +++K ++I +D+ +
Sbjct: 223 EENNENLV--LQAEYEQKLAEYKALQEKRSQFEEQNRELENKLSKYKPELIEALDDPEAY 280
Query: 235 VDELEKNITDLMTQ 276
V +L I +L Q
Sbjct: 281 VQKLMGKIAELNKQ 294
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 67 DNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIIN--RIDEMGSRVD 240
DNI K NE P +DP Q L+Q +QD + ++N I+++
Sbjct: 2062 DNIEKKLANEIEVPTNDPSR--------QDLVQQLQDVILECEEVVVNCDNIEKLEESKL 2113
Query: 241 ELEKNITDLMTQAGVENEK 297
+LEK L+ Q G EK
Sbjct: 2114 KLEK-ARPLLDQIGDNVEK 2131
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 175 LACFVEVIVRIVLLPAYFLDRWLVLSIHFLCF*QYC 68
++CF+ ++ V L + F+ + V+ IH CF +C
Sbjct: 475 ISCFLSFLILCVHLTSAFMSLFPVIIIHISCFIDFC 510
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 175 LACFVEVIVRIVLLPAYFLDRWLVLSIHFLCF*QYC 68
++CF+ ++ V L + F+ + V+ IH CF +C
Sbjct: 486 ISCFLSFLILCVHLTSAFMSLFPVIIIHISCFIDFC 521
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 124 NMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEK--NITDLMTQA 279
N+ + ++V L N + + I+N ++ M +RVD+LEK ++ DL T+A
Sbjct: 98 NLDKTYEHVSKLKDNPVKDSSKVREAILN-LEFMKTRVDDLEKVVDVPDLTTKA 150
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 124 NMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEK--NITDLMTQA 279
N+ + ++V L N + + I+N ++ M +RVD+LEK ++ DL T+A
Sbjct: 98 NLDKTYEHVSKLKDNPVKDSSKVREAILN-LEFMKTRVDDLEKVVDVPDLTTKA 150
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 94 EYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITD 264
+Y+ + K Q + V L +Q + +S S ++N+I+ M R ++LEK+I D
Sbjct: 159 DYTYKQRELKEAQNNSDLVLELKAALQQE-KSSSHGMLNKIEIMRQRCEDLEKSILD 214
>AC006774-5|AAF60618.1| 363|Caenorhabditis elegans Hypothetical
protein Y46H3A.4 protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 497 KFFG*GSFVWGNCNFRFSEYVAFLIYVICC 408
K FG F+WG+C+ ++Y FL+++ C
Sbjct: 216 KKFGHPIFIWGSCSNTPTKYENFLVFLSWC 245
>AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical
protein T12B5.2 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 143 CVTSCIFFGSLAGVEYSFSVFLTILSEFGSAILKKIK 33
C CI L ++S LTILS F + +LKK++
Sbjct: 169 CSKKCILVEELILWDFSLDEILTILSCFDANVLKKLE 205
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 610 WKVTR--LLKIADFSL*IQYTNENN*NDSNEMIQFDI 506
WKV R K + L I + N NN N+ +M+Q DI
Sbjct: 13 WKVKRRTFSKAMNRRLTISHKNNNNMNNKQKMVQLDI 49
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 610 WKVTR--LLKIADFSL*IQYTNENN*NDSNEMIQFDI 506
WKV R K + L I + N NN N+ +M+Q DI
Sbjct: 13 WKVKRRTFSKAMNRRLTISHKNNNNMNNKQKMVQLDI 49
>AC006708-1|AAL77186.1| 129|Caenorhabditis elegans Hypothetical
protein Y110A7A.20 protein.
Length = 129
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 148 VQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEK 252
V LLQ+ QDK +DQ+ N G +D +E+
Sbjct: 26 VAELLQSAQDKSSEFNDQLKNFQTTTGGLIDSIEE 60
>U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine
receptor, class h protein76, isoform b protein.
Length = 349
Score = 27.5 bits (58), Expect = 9.4
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 387 IFEAF*LTANHVY*KSYIFTKPKITISPNKTTSSKEFEIGISN*IISFESFQLFSLVYCI 566
+F AF V+ KS F+K I + K+F IGI ++ +F + S+ YC
Sbjct: 230 LFYAFTCLRYLVFSKSSSFSKRTIELQ-------KKFFIGILIQVLVPYAFIVPSVSYCC 282
Query: 567 YKLKSAIFNNLV-TFQPSTSNLKFSFMITVILVQCIQLVW 683
Y + S +N ++ F N + + T+ L+ C W
Sbjct: 283 YSVYSNYYNQMLNNFFVLVFNF-YGTVSTIGLISCHTAYW 321
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +3
Query: 429 KSYIFTKPKITISPNKTTSSKEFEIGISN*IISFESFQLFSLVYCIYKLKSAIFNNLVTF 608
K + TKP T P T + E I + SF+ + ++ CI +F+ + +
Sbjct: 420 KFIVITKPVKTFVPFLATIKQFTEEDIPQILGSFDGTNILDVIDCIQSSSVDVFSEAIRY 479
Query: 609 QPSTSNLK 632
+ LK
Sbjct: 480 NQQVTLLK 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,445,922
Number of Sequences: 27780
Number of extensions: 318269
Number of successful extensions: 1085
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -