Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0879
         (627 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIP5 Cluster: Putative uncharacterized protein; n=5; ...    38   0.20 
UniRef50_Q4JK70 Cluster: Group 15 allergen protein; n=3; Dermato...    36   1.1  
UniRef50_Q4SSP9 Cluster: Chromosome 15 SCAF14367, whole genome s...    32   9.8  

>UniRef50_Q8IIP5 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 333

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 297 ISEKALITNFVVRI*KR-IKVIQNFISRTYLIYNGN*TDNTSVLLFTLG*EKNNFIVYLT 473
           I+EK    N    + K  + ++   I++  +I N N  DN    +  +   KNNF +Y++
Sbjct: 260 INEKEKYINDKSSVEKNELNMMNRNINKNNIINNNNTIDNNKNRIH-INENKNNFFIYIS 318

Query: 474 KINESCSDFFVVVN 515
            I + CS+FF+ ++
Sbjct: 319 NIFKKCSNFFIAID 332


>UniRef50_Q4JK70 Cluster: Group 15 allergen protein; n=3;
           Dermatophagoides|Rep: Group 15 allergen protein -
           Dermatophagoides pteronyssinus (House-dust mite)
          Length = 558

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 380 GPRYKILNDLYTFLNTNDKISYQCLFG 300
           GP+Y +LN ++  +N ++K SY+CL G
Sbjct: 388 GPKYPLLNKVHNMINGDEKNSYECLLG 414


>UniRef50_Q4SSP9 Cluster: Chromosome 15 SCAF14367, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14367, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 862

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 1   ANRCATEPSALFNGPSSLKFFLNIFQRIFQCSVRDVLFFFTSEKVNQCSMKY 156
           + RC  +P  +   P +L+F+LN    I  CS  + +  + SE+   CS  Y
Sbjct: 419 SKRCQKQPRIVLQRPRALRFWLNYALSILYCSENNQVGVY-SEENRSCSCPY 469


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,780,961
Number of Sequences: 1657284
Number of extensions: 10376386
Number of successful extensions: 18186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18185
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)