Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0877
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 136 1e-32
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 121 4e-28
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 100 1e-21
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 92 3e-19
08_01_0397 - 3509186-3510291,3510322-3512335 91 5e-19
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 84 8e-17
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 84 1e-16
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 81 8e-16
02_01_0381 - 2764331-2764342,2768966-2769907 72 3e-13
06_03_1255 + 28780181-28781172,28782065-28782932 71 1e-12
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 62 3e-10
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 61 9e-10
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 59 3e-09
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 58 5e-09
03_05_0865 - 28365430-28367640 58 8e-09
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 55 4e-08
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 55 4e-08
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 51 9e-07
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 50 1e-06
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 50 2e-06
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 49 4e-06
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 49 4e-06
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 48 9e-06
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 47 1e-05
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 46 2e-05
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 46 2e-05
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 45 6e-05
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 44 1e-04
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 42 3e-04
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 42 4e-04
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 41 7e-04
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 41 7e-04
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 41 7e-04
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 41 7e-04
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 41 7e-04
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 41 0.001
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 40 0.001
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 38 0.005
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 38 0.007
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 36 0.028
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 36 0.037
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 35 0.049
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 35 0.065
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 34 0.085
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 34 0.11
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.20
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 33 0.26
03_02_0189 - 6253659-6255380 32 0.46
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 31 0.60
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 31 0.80
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 30 1.8
01_06_0886 + 32725504-32725824,32725905-32726658,32727911-327280... 29 3.2
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 28 5.6
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 5.6
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 28 7.4
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 136 bits (329), Expect = 1e-32
Identities = 61/129 (47%), Positives = 85/129 (65%)
Frame = +2
Query: 236 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 415
P D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPI 595
Y Q + G+ EPTPIQ+QGWP+A+ G++++G+AQTGSGKT + L + QP +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLS-YLLPGLVHVGAQPRL 224
Query: 596 RRGDGPELL 622
+GDGP +L
Sbjct: 225 EQGDGPIVL 233
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 121 bits (292), Expect = 4e-28
Identities = 56/126 (44%), Positives = 80/126 (63%)
Frame = +2
Query: 245 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQ 424
D L F KNFY P+V + EVE YR + E+TV G +V P++ F + FP+YV
Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 103
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPIRRG 604
Q + G+ EPTPIQ+QGWP+A+ G++L+G+A+TGSGKT + + +N QP + G
Sbjct: 104 QEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA-YLLPAIVHVNAQPILAPG 162
Query: 605 DGPELL 622
DGP +L
Sbjct: 163 DGPIVL 168
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 100 bits (239), Expect = 1e-21
Identities = 45/125 (36%), Positives = 73/125 (58%)
Frame = +2
Query: 239 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 418
D ++ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPIR 598
+ + GY++PT IQ Q PI +SG++++G+A+TGSGKT + + +QP +
Sbjct: 230 LMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKT-AAFVLPMIVHIMDQPELE 288
Query: 599 RGDGP 613
+ +GP
Sbjct: 289 KEEGP 293
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/125 (36%), Positives = 69/125 (55%)
Frame = +2
Query: 239 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 418
D + QPF KN Y + + EV YR E+ V G +V PI+ + ++
Sbjct: 236 DHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSK 295
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPIR 598
+ +K +G+++P PIQAQ PI MSG++ +G+A+TGSGKT L + +QPP+
Sbjct: 296 LLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAF-VLPMLRHVKDQPPVV 354
Query: 599 RGDGP 613
GDGP
Sbjct: 355 PGDGP 359
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 91.5 bits (217), Expect = 5e-19
Identities = 46/125 (36%), Positives = 70/125 (56%)
Frame = +2
Query: 239 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 418
D + QPF KNFY + K + EV YR + E+ V G +V PI+ + ++
Sbjct: 375 DHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSK 434
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPIR 598
+ +K +G+++P IQAQ PI MSG++ +G+A+TGSGKT L + +QP +
Sbjct: 435 LLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAF-VLPMLRHVKDQPAVV 493
Query: 599 RGDGP 613
GDGP
Sbjct: 494 PGDGP 498
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 84.2 bits (199), Expect = 8e-17
Identities = 42/99 (42%), Positives = 56/99 (56%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 506 LVGVAQTGSGKTFGLHFASNLCTLNNQPPIRRGDGPELL 622
+V VA+TGSGKT G + Q R DGP +L
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFILLKRLQHNSR--DGPTVL 256
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 506 LVGVAQTGSGKTFG 547
+V +A+TGSGKT G
Sbjct: 190 VVAIAKTGSGKTLG 203
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 81.0 bits (191), Expect = 8e-16
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +2
Query: 254 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 430
S++P ++ F P+ P++ + YR HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFG 547
+ G+ PTPIQAQ WP+A+ +++V +A+TGSGKT G
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLG 657
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +2
Query: 293 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 469
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 470 AQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQ--PPIRRGDGP 613
QG P+ +SG++++G+A TGSGKT + L + PI G+GP
Sbjct: 210 VQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGP 259
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Frame = +2
Query: 293 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 469
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 470 AQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLNNQ--PPIRRGDGP 613
QG P+A+SG++++G+A TGSGKT + L + PI G+GP
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGP 250
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G++L+ AQTG
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 530 SGKT 541
SGKT
Sbjct: 132 SGKT 135
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 60.9 bits (141), Expect = 9e-10
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G++L+ AQTG
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 530 SGKTFGLHFASNLCTLNNQPPIR 598
SGKT F ++++PP R
Sbjct: 285 SGKTAAFCFPIISGIMSSRPPQR 307
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G++L+ AQTG
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 530 SGKTFGLHFASNLCTLNNQPPIR 598
SGKT F + ++PP R
Sbjct: 371 SGKTAAFCFPIISGIMRSRPPPR 393
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 335 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 502
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 503 NLVGVAQTGSGKTFGLHF 556
A TGSGKT F
Sbjct: 185 ECFACAPTGSGKTLAFLF 202
>03_05_0865 - 28365430-28367640
Length = 736
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 511
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 512 GVAQTGSGKTFGLHFASNLCTLNNQPPI 595
G+A+TGSGKT L + PPI
Sbjct: 357 GIAETGSGKT-AAFVLPMLSYITRLPPI 383
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V SG EV P+ F E + + ++ Y PTP+Q PI+++G++L+ AQTG
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 530 SGKTFGLHFASNLCTLNNQPPIRR 601
SGKT F + + PP +R
Sbjct: 203 SGKTAAFCFPI-ISGIMRGPPAQR 225
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 500 KNLVGVAQTGSGKT 541
++L+ A TGSGKT
Sbjct: 220 RSLLVSADTGSGKT 233
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FE + V +GV+ GY+ PTPIQ + P+ ++G ++ +A+TGSGKT
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKT 77
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
P + E P+ V MG+KEPT IQA+ P A+ G++L+G+ QTGSGKT
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKT 92
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
P+ F P V K G++ P+PIQA WP + G++ +G+A TGSGKT
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKT 143
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F E N + + + +GY++PTPIQA P+A++G+++ G A TGSGKT
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKT 245
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +2
Query: 431 VKTMGYKEPTPIQAQGWPIAM-SGKNLVGVAQTGSGKT--FGLHFASNL 568
V+ +G+KEPTPIQ +P A GK+++G A+TGSGKT FGL L
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRL 205
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +2
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
MG+K PT IQA+ P A+ G++++GV QTGSGKT
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKT 34
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFG--LHFASN 565
F+E + +++ ++ G + TPIQ + P+ + GK++V A+TGSGKTF L
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHE 144
Query: 566 LCTLNNQPPIRR 601
L L+ + IR+
Sbjct: 145 LLKLSAEGRIRK 156
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFGLHFASNLCTLN-NQPPIRRGDG 610
MG++ PT IQAQ P+AMSG++++ A TG+GKT + A + L +P + R DG
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLA-YLAPIVHLLQMREPRVERTDG 98
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
P++V Q + +GY PT +Q Q P+ +SG++ + AQTGSGKT
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKT 92
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT--FGLHFASN 565
F+E + + G++ GY E + IQ P A+ G++++G A+TGSGKT F + +
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLMS 141
Query: 566 LCTLNNQPPIRRGDGPELL 622
TLN + + + E +
Sbjct: 142 AATLNLGSSLEQEEASECI 160
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
E EE ++ E+T SG E +P ANF + +++ +K+ G K PIQA + + +
Sbjct: 82 EEEEDDDEGELTASGDE--DPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVL 139
Query: 494 SGKNLVGVAQTGSGKT 541
G +LVG A+TG GKT
Sbjct: 140 DGHDLVGRARTGQGKT 155
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +2
Query: 296 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 475
T +R P +++ E T GVEV I F++ D + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQR 60
Query: 476 GWPIAMSGKNLVGVAQTGSGKT 541
+SG++++ AQ+G+GKT
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKT 82
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F E + + ++ M Y T IQA+ P ++GK+++G A+TGSGKT
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKT 147
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FE+ + G+ G++ P+PIQ + PIA++G +++ A+ G+GKT
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 198
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F E ++ ++G + PT +Q + P A+ G++++G+A+TGSGKT
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKT 128
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FE+ + G+ G++ P+PIQ + PIA++G +++ A+ G+GKT
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 175
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FE+ + G+ G++ P+PIQ + PIA++G +++ A+ G+GKT
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 185
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
+ FEE + V + MG +PT IQ G P ++G ++V + TGSGKT
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKT 161
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/82 (29%), Positives = 46/82 (56%)
Frame = +2
Query: 296 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 475
T +R P +++ E T GVEV I F++ + + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQR 60
Query: 476 GWPIAMSGKNLVGVAQTGSGKT 541
+SG++++ AQ+G+GKT
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKT 82
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT--FGLHFASN 565
F + D ++ M Y T IQA+ P M G +++ A+TGSGKT F +
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 566 LCTLNNQPPIRRGDG 610
LC L P R G G
Sbjct: 148 LCRLRFSP--RNGTG 160
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F++ + VK GY+ T +Q P+ + GK+++ A+TG+GKT
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKT 57
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT--FGLHFASNLCTLNNQPPI 595
+ +K GY++ T +Q PI + G++++ A+TG+GKT F L L TL P I
Sbjct: 87 KAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSI 145
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
V + +K G++ TP+QA P+ +S K++ A TGSGKT
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKT 74
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F+E D + +++ G+ P+ IQA + + GK+ + Q+GSGKT
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKT 291
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FEE + + GY + T +Q P+ + GK+++ A+TG+GK+
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKS 393
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 368 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
EVH + F++ + + +G+ G+++P+ IQ +G G +++ AQ+G+GKT
Sbjct: 38 EVH---ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 92
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 34.3 bits (75), Expect = 0.085
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKT-MGYKEPTPIQAQGWPIAMSG--KNLVGV 517
+ SG V+ FE+ + +G+ MG+ P+ IQA P+ ++ K+L+
Sbjct: 87 QAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQ 146
Query: 518 AQTGSGKT 541
A GSGKT
Sbjct: 147 AHNGSGKT 154
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
F++ + + +G+ G+++P+ IQ +G G +++ AQ+G+GKT
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 92
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT--FGL 550
P V Q + + G + PIQ AM GK++VG A+TG+GKT FG+
Sbjct: 107 PKIVSQ-LASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGI 154
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 488 AMSGKNLVGVAQTGSGKT--FGLHFASNLCTLNNQPPIRRGDGPELL 622
A+ G++L+ A+TG+GKT FG+ L ++ +RRG P +L
Sbjct: 164 ALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVL 210
>03_02_0189 - 6253659-6255380
Length = 573
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FEE P + + G PT +Q+ PI + V + TGSGKT
Sbjct: 133 FEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKT 182
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKT 541
FEE P + + G PT +Q+ PI + V + TGSGKT
Sbjct: 595 FEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKT 644
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTFG 547
+E D + + G P+ +QA P ++ +++ A+TGSGKT G
Sbjct: 84 WESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHG 135
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 488 AMSGKNLVGVAQTGSGKT--FGLHFASNLCTLNNQ 586
AM GK+++G A+TG+GKT FG+ + N +
Sbjct: 127 AMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEK 161
>01_06_0886 +
32725504-32725824,32725905-32726658,32727911-32728033,
32729477-32729535,32731427-32731732,32732006-32732236,
32732332-32732484,32732567-32732836
Length = 738
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 150 GLATVAIDLEDLEALVGKKNSLEGRTCDAQIGILFHSNLSTKTFMIHILQFSKDHHMKSK 329
G + + D L + + SLE D + H ++ + H+ Q ++DHH K
Sbjct: 622 GTFSPSYDYFSLVSFLDASPSLETLNLDVTNDPMKHESILGHSSKSHLRQMAEDHHCHLK 681
Query: 330 SIEI 341
++EI
Sbjct: 682 NVEI 685
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 446 YKEPTPIQAQGWPIAMSGKNLVG-VAQTGSGKT 541
Y+ TP+ +G +++SG +G V +TGSGK+
Sbjct: 1335 YRPNTPLILKGITVSISGGEKIGVVGRTGSGKS 1367
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 311 SPYEVEEYRNKHEVTVSGVEVHN 379
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 461 PIQAQGWPIAM-SGKNLVGVAQTGSGKTFGLHFASNLCTLNNQPPIR 598
PIQ Q + + S N++ A TGSGKT A L N QP ++
Sbjct: 1284 PIQTQAFHVLYHSDNNVLLGAPTGSGKTISAELAM-LHLFNTQPDMK 1329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,006,935
Number of Sequences: 37544
Number of extensions: 362475
Number of successful extensions: 1029
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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