BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0877 (650 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 69 3e-14 DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 25 0.48 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.4 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 7.8 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.8 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 7.8 AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 7.8 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 69.3 bits (162), Expect = 3e-14 Identities = 32/65 (49%), Positives = 42/65 (64%) Frame = +2 Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 526 +V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G++L+ AQT Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQT 242 Query: 527 GSGKT 541 GSGKT Sbjct: 243 GSGKT 247 >DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein protein. Length = 424 Score = 25.4 bits (53), Expect = 0.48 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +1 Query: 454 TDAHSSSRLADSYVWKEFSWRSPNGF 531 +D+ + +L + Y WK + PNG+ Sbjct: 16 SDSQAQEKLKNIYSWKALEFAFPNGY 41 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 22.6 bits (46), Expect = 3.4 Identities = 8/26 (30%), Positives = 14/26 (53%) Frame = +1 Query: 538 NVWPTFCQQFVHIK*PTAYSER*WSR 615 ++W T C VH + P+ ++ W R Sbjct: 326 SIWITVCVLNVHFRSPSTHNMSPWVR 351 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 21.4 bits (43), Expect = 7.8 Identities = 6/16 (37%), Positives = 8/16 (50%) Frame = -2 Query: 244 PIWASHVLPSREFFFP 197 P+W H+ R FP Sbjct: 634 PVWGRHIYDGRAMGFP 649 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 Query: 78 TGIIAVETVVPNLEEATNSA 137 T + A V P +EE TN+A Sbjct: 412 TALGAAALVAPGMEEPTNTA 431 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 21.4 bits (43), Expect = 7.8 Identities = 6/16 (37%), Positives = 8/16 (50%) Frame = -2 Query: 244 PIWASHVLPSREFFFP 197 P+W H+ R FP Sbjct: 634 PVWGRHIYDGRAMGFP 649 >AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly protein MRJP2 protein. Length = 452 Score = 21.4 bits (43), Expect = 7.8 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = +2 Query: 305 KRSPYEVEEYRNKHEVTV 358 K P++V+++R+K VT+ Sbjct: 64 KNYPFDVDQWRDKTFVTI 81 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 175,292 Number of Sequences: 438 Number of extensions: 3880 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19682733 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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