Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0876
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0455 - 19203028-19203186,19203485-19203859,19203981-192040...    29   5.6  
09_06_0262 - 21921647-21922796,21922897-21923423                       28   7.4  

>12_02_0455 -
           19203028-19203186,19203485-19203859,19203981-19204090,
           19204200-19204243,19204435-19204635,19204937-19205079,
           19205194-19205487,19205956-19206003
          Length = 457

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 494 DTWNTIKRRDSHTILYHSFAW-GLPIATTSIGLSILYI 604
           D W+T+K+   H ++Y +F +  +      IGL+IL++
Sbjct: 313 DQWHTLKQGVPHLVVYTAFFYFSISCFVIGIGLNILFL 350


>09_06_0262 - 21921647-21922796,21922897-21923423
          Length = 558

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 487 IKKSPKPSCCIEILYPGRNNTTE*YTDIITRHGH 386
           IK  P P C + I + G     E   D+  RHGH
Sbjct: 194 IKWCPGPGCTLAIEFVGGGGGEEKQDDVECRHGH 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,085,132
Number of Sequences: 37544
Number of extensions: 381490
Number of successful extensions: 765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)