BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0876 (788 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical pr... 29 3.8 U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 5.0 U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 29 5.0 AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 5.0 U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical pr... 28 6.6 U64846-1|AAG24113.2| 352|Caenorhabditis elegans Serpentine rece... 28 6.6 U13019-14|AAK84568.2| 316|Caenorhabditis elegans Serpentine rec... 28 6.6 >Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical protein F26D2.4 protein. Length = 332 Score = 29.1 bits (62), Expect = 3.8 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -2 Query: 172 VKFIHNSYGHVLFTSCMMATKCLNRWISHFKKYIK*FLIFL 50 + F N Y +++ T ++ + R I HF Y+ FL FL Sbjct: 114 ILFFENRYNYLVRTDSTSQSRKIKRVIQHFINYLLAFLAFL 154 >U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor protein 2 protein. Length = 1338 Score = 28.7 bits (61), Expect = 5.0 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +2 Query: 422 CSIISAWIQYFYTATWFWTLFYAIDTW----NTIKRRDSHTILYHSFAWGLPIATTSIGL 589 C +++ + YF+ +++ W L + + + LY+ F +G P +I Sbjct: 960 CGVVAILLHYFFLSSFCWMLLEGYQLYMMLIQVFEPNRTRIFLYYLFCYGTPAVVVAISA 1019 Query: 590 SI 595 I Sbjct: 1020 GI 1021 >U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical protein T25D10.5 protein. Length = 288 Score = 28.7 bits (61), Expect = 5.0 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 101 IQTFCCHHTGSKEDMAVRIMDEFN 172 I+T CH + K+D +R+ D+FN Sbjct: 219 IETHLCHFSKMKQDQLMRLADKFN 242 >AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like protein LAT-2 protein. Length = 1338 Score = 28.7 bits (61), Expect = 5.0 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +2 Query: 422 CSIISAWIQYFYTATWFWTLFYAIDTW----NTIKRRDSHTILYHSFAWGLPIATTSIGL 589 C +++ + YF+ +++ W L + + + LY+ F +G P +I Sbjct: 960 CGVVAILLHYFFLSSFCWMLLEGYQLYMMLIQVFEPNRTRIFLYYLFCYGTPAVVVAISA 1019 Query: 590 SI 595 I Sbjct: 1020 GI 1021 >U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical protein F07E5.9 protein. Length = 412 Score = 28.3 bits (60), Expect = 6.6 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 347 LVRSSLWLKYKNIMPMPGDDVSVLFCSIISAWIQ 448 +VR +W+ KN P P DD+S + I A I+ Sbjct: 290 VVRRMVWMLKKNTEPKPEDDISPILIDWIVAIIK 323 >U64846-1|AAG24113.2| 352|Caenorhabditis elegans Serpentine receptor, class t protein3 protein. Length = 352 Score = 28.3 bits (60), Expect = 6.6 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = +2 Query: 356 SSLWLKYKNIMPMPGDDVSVLF----CSIISAWIQYFYTATWFWTLFYAIDTWN 505 +S+WL YK+ + V + F II A++QYFY+ +W L + W+ Sbjct: 228 TSMWL-YKSKRQIILQGVVLCFFHGVTGIIHAYMQYFYSPSWMIVLAQIVWQWS 280 >U13019-14|AAK84568.2| 316|Caenorhabditis elegans Serpentine receptor, class g (gamma)protein 4 protein. Length = 316 Score = 28.3 bits (60), Expect = 6.6 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 193 YYIIRISVKFIHNSYGHVLFTSC-MMATKCLNRWISHFKKYIK*FLIF 53 +Y+ + K + +S+ + SC +M TK W SH KK I L++ Sbjct: 103 FYLYAFTAKSVIHSFLSINRASCVLMPTKYAYIWRSHMKKVIVFILLY 150 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,635,601 Number of Sequences: 27780 Number of extensions: 379846 Number of successful extensions: 873 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 852 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 873 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1914239236 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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