BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0873 (708 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 26 0.40 M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 23 3.7 DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.7 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.7 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.7 DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 5.0 DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 6.6 AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 8.7 AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 8.7 >AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc finger domain-Z1 isoform protein. Length = 111 Score = 25.8 bits (54), Expect = 0.40 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -3 Query: 490 LGRCQYHKNFHQIHRHSPFRRYRKDRVQCK*SRRKRGSHLDRVVLQ 353 L + HK+ + +HS + RK+ Q + R++ H DRV Q Sbjct: 45 LNSLRNHKSIYH-RQHSKNEQQRKEMEQMREREREQREHSDRVTSQ 89 >M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H40. ). Length = 74 Score = 22.6 bits (46), Expect = 3.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -1 Query: 420 KTAFNASRVAASEEAILTEWFFSVQERLYFTL 325 +TAF ++ A E T + SV ERL L Sbjct: 12 RTAFTYEQLVALENKFKTTRYLSVCERLNLAL 43 >DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride channel protein. Length = 383 Score = 22.6 bits (46), Expect = 3.7 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +2 Query: 602 ITITFDDAINNNNIELYKEIF*RQAQKPERLR 697 +T+ D+IN ++ +IF Q+ + RLR Sbjct: 36 VTVLSIDSINEESMTYVADIFLAQSWRDSRLR 67 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 22.6 bits (46), Expect = 3.7 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 602 ITITFDDAINNNNIELYKEIF*RQAQKPERLR 697 +T+ D+I+ N++ +IF Q K RLR Sbjct: 67 VTVMGLDSIDENSMTYAADIFFAQTWKDNRLR 98 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 22.6 bits (46), Expect = 3.7 Identities = 9/32 (28%), Positives = 15/32 (46%) Frame = -1 Query: 99 LVSLSPPSVTISKRAGEQEARGQSSDTGVARH 4 L+ L P ++ +GE +RG S + H Sbjct: 375 LLGLMPSGSSVHSDSGENNSRGHSGQSSSHHH 406 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 22.2 bits (45), Expect = 5.0 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 602 ITITFDDAINNNNIELYKEIF*RQAQKPERLRFQR 706 +TI DAI+ N++ ++ Q K ERL F + Sbjct: 67 LTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQ 101 >DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR protein. Length = 381 Score = 21.8 bits (44), Expect = 6.6 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -1 Query: 324 LVLELTIFHSIFPIAGLFLNI 262 +V+ LTI + I + G+F NI Sbjct: 39 MVIPLTIIYMIIFVTGIFGNI 59 >AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.4 bits (43), Expect = 8.7 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = -3 Query: 418 DRVQCK*SRRKRGSHLDRVVLQCTREALFYAP 323 DRV + + R +DR L C R + + P Sbjct: 313 DRVLSELVSKMREMKMDRTELGCLRSIILFNP 344 >AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 21.4 bits (43), Expect = 8.7 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = -3 Query: 418 DRVQCK*SRRKRGSHLDRVVLQCTREALFYAP 323 DRV + + R +DR L C R + + P Sbjct: 313 DRVLSELVSKMREMKMDRTELGCLRSIILFNP 344 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 190,791 Number of Sequences: 438 Number of extensions: 4377 Number of successful extensions: 16 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21804885 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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